Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01681 ATGGCCCAACAAAAGAGGCTAAAAAGTCTCACTGACAACCTCAAAGACAAAGCCTCAGTCATCGCCGCTTCTCTATCACTCAATCGCCACGTGTCCTCCATTCACCTCCACGTCCTCCGCGCCACCACTCACACCCTCTCCTCTCCTCCCTCCGAATCAAGAATCGCCGCCGTCCTCACCGCCGGCAACGGCTCCCACCTCCTCCCTCGCGCGTGCATCAACGCTCTCATGGACCGTCTTCACCGCACGCGAAGTTCCACCGTAGCCCTCAAATGTCTCTTCACTCTTCACAACATCACAATCAAAGGACCCTTCACTCTCAAGGACCAGCTTTCTTGTTACCCTTCCTATGGCGGCCACAATTTCCTTAACCTCTCCACGTTCCGCGATGACTCGGATTTCGACTCGTTGCAACTCAGTTCCTGGGTTCGTTGGTATGCAGGGGTTATAGAACAGAGCTTAACCGTTTCAAGAGTCTTGGGTTATTACCTAACCACCTCCAAGAAAGATTTACAAGAAAGGAAGTGTTTGGTTTTGAAGGTGTCGAATGCGGATTTGTTGTATAAATTGGAAGGTCTTGTTGTTTTTGTGGAGCAAATAAGCCGAGTCCCTGATTCGTTGCAGCTTCAGAGGAATGAATTGGTGTATGAAGTTGTGAGATTGGTGGGGGAAGATTATGGAAATGTTCAAGGTGAGATTTTGATGAGATTGGAGGAAGTTGGGAAGAGGATGGAAGAAGAGGGTATGGATGTGGGGGAATTGAATGAGTTGGTTGGGTATTTGAAAAGATTGGAAGAGAGTAAAGAAAAGTTGGTGCTTTTGTTTGTGAATAGAAGGAAGAATAATGGGTTCTGGGAATTGGTTAAGCAGATAAAGGAAAAAGGGGTGGGGAAGAAGGAGGACATAGAAGGGAAGTGGCTCACGGTGGTGGTGAATAACAACGCGGCCGAGTTGACTCGGTCTACTAACCCGTTTCTTGAACCAGGGCAACTGTGTCCGGTCCCACAGTTAAGCTTTGCAACGGTAAGATGA 1032 0.4835 MAQQKRLKSLTDNLKDKASVIAASLSLNRHVSSIHLHVLRATTHTLSSPPSESRIAAVLTAGNGSHLLPRACINALMDRLHRTRSSTVALKCLFTLHNITIKGPFTLKDQLSCYPSYGGHNFLNLSTFRDDSDFDSLQLSSWVRWYAGVIEQSLTVSRVLGYYLTTSKKDLQERKCLVLKVSNADLLYKLEGLVVFVEQISRVPDSLQLQRNELVYEVVRLVGEDYGNVQGEILMRLEEVGKRMEEEGMDVGELNELVGYLKRLEESKEKLVLLFVNRRKNNGFWELVKQIKEKGVGKKEDIEGKWLTVVVNNNAAELTRSTNPFLEPGQLCPVPQLSFATVR. 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01681 343 FunFam Putative clathrin assembly protein At4g40080 6 163 - -
Seca4g01681 343 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
Seca4g01681 343 CDD ANTH_N_AP180_plant 34 157 - -
Seca4g01681 343 PANTHER CLATHRIN ASSEMBLY PROTEIN 12 302 IPR045192 GO:0048268|GO:0072583
Seca4g01681 343 Pfam ANTH domain 38 225 IPR011417 GO:0005543
Seca4g01681 343 SUPERFAMILY ENTH/VHS domain 33 162 IPR008942 -
Seca4g01681 343 Gene3D - 5 163 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01681 Seca-Chr4 27331354 27332385 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01681 - - gmx:100788852 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01681 4 27331354 27332385 Seca4g01681 4 27331354 27332385 ECH