Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01629 ATGACTTCGAATTCCGATTTGGTGCGTACCATTGAGTCGGTGCTAGGCGTTTCGCTCGGCGATTCGGTTTCGGATTCGTTAGTTCTGATCGTGACGACCTCCGCTGCCGTCATAATTGGGCTTTTTGTGTTCTTATGGAAGAAATCGTCGGATCGGAGCAAGGAGGTGAAGCCGTTGGTAGTGCCCAAGTCGTTGATGAAGGATGAAGACGATGATATTGACGTTGGCTTGGGCAAGACTAAGGTGACTGTTTTCTTCGGTACTCAGACTGGTACCGCTGAGGGCTTTGCTAAGGCACTGGCAGAGGAGATCAAGGCAAGGTATGAAAAAGCAGCTGTGAAAGTTGTTGATCTGGATGACTATGCAATGGATGATAGTGAATATGAGGAGAAGCTGAAGAAAGAGACTCTTGCATTTTTCATGCTGGCAACTTATGGAGATGGAGAGCCAACTGACAATGCTGCAAGATTCTACAAATGGTTTACTGAGGGTAAAGATGAGAGGGGCACCTGGCTTCAACAGCTCACATATGGAGTTTTTGGCCTAGGCAACAGGCAGTATGAACATTTTAATAAGATAGGTAAAGTGGTTGATGAAGAGCTTATTGAACAAGCGAGTGGTACTCTACTGTTGGATGCAATATATCTTATATGTGGTATTGTGTTTGCGACAGGTGCAAAGCGTCTTGTTCCACTTGGACTAGGTGATGATGATCAATCTATTGAGGATGATTTTTCTGCCTGGAAAGAAACCCTGTGGCCTGAGTTGGATCAGCTGCTCCGAGATGAGGATGATGTAAATACTGTTTCCACTCCGTATACAGCTGCTATTCCTGAATATCGAGTAGTGATTCATGACCCCACTGTCACACCATCGTATGATAATCACTTCAATGTGGCAAATGGGAATGCTGTATTTGATATTCATCATCCTTGCAGGGTGAATGTTGCTGTTAAAAGGGAGCTTCACAAACCTGAGTCTGATCGATCTTGCATACATTTGGAGTTTGATATATCAGGGACTGGCATAACATACGAAACTGGAGACCATGTGGGTGTTTATGCTGAGAACTGTGATGAAACTGTTGAAGAAGCTGGGAAGTTGTTGGGTCAGAATTTAGATTTGCTGTTTTCTCTTCACATCGATAAGGAGGATGGCACTTCCTTAGGAGGTTCTCTGCCACCTCCTTTCCCTGGTCCTTGCACACTGCGCGTTGCATTAGCACATTATGCAGATCTCTTAAACCCCCCACGAAAGGCTGCTTTAGTTGCATTAGCTGCTCATGCTTCTGAGCCTAGTGAATCAGAAAGATTGAAGTTCCTCTCATCTCCACAGGGGAAGGATGAGTACTCAAAATGGGTGGCTGGAAGCCAGAGAAGTTTGCTTGAGGTGATGGCTGAATTTCCATCAGCAAAACCTCCCCTTGGTGTGTTTTTTGCTGCCGTAACCCCTCGCTTACAGCCTCGTTATTATTCTATTTCATCCTCTCCTAGGTTTGCCCCACAAAGGGTACACGTCACTTGTGCCTTGGTGTATGGTCCAACTCCCACTGGCAGAATTCACAAAGGAATATGTTCAACCTGGATGAAGAATGCTACTCCCTTAGAGGAAAGTCGTGACTGTAGCTGGGCTCCCATTTTTATCAGGCCATCAAATTTCAAGCTACCAGTTGATAATTCGATTCCCATTATTATGATTGGACCTGGTACTGGATTGGCACCTTTTAGGGGATTTTTACAGGAAAGATTTGCTCTCAAAGAGGATGGTGTTCAACTTGGTCCTGCACTACTCTTCTTCGGATGCAGGAACCGTCAAATGGATTTTATTTACGAGGATGAGCTAAAGAATTTTGTGGAACAAGGTTCTCTTTCAGAGTTGATAGTTGCATTCTCTAGAGAGGGGCCTGAAAAGGAGTATGTTCAACACAAGATGATGGATAAAGCAGCATACCTTTGGAGTCTGATTTCTCAGGGAGGCTATCTTTATGTCTGTGGTGATGCCAAGGGTATGGCCAGAGATGTTCATCGAACACTTCATACCATTGTCCAGAAGCAGGAAAATGTGGACTCATCAAAGGCAGAGGCTGTAGTGAAAAAACTCCAGATGGATGGACGTTACCTTAGGGATGTCTGGTGA 2136 0.4485 MTSNSDLVRTIESVLGVSLGDSVSDSLVLIVTTSAAVIIGLFVFLWKKSSDRSKEVKPLVVPKSLMKDEDDDIDVGLGKTKVTVFFGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDSEYEEKLKKETLAFFMLATYGDGEPTDNAARFYKWFTEGKDERGTWLQQLTYGVFGLGNRQYEHFNKIGKVVDEELIEQASGTLLLDAIYLICGIVFATGAKRLVPLGLGDDDQSIEDDFSAWKETLWPELDQLLRDEDDVNTVSTPYTAAIPEYRVVIHDPTVTPSYDNHFNVANGNAVFDIHHPCRVNVAVKRELHKPESDRSCIHLEFDISGTGITYETGDHVGVYAENCDETVEEAGKLLGQNLDLLFSLHIDKEDGTSLGGSLPPPFPGPCTLRVALAHYADLLNPPRKAALVALAAHASEPSESERLKFLSSPQGKDEYSKWVAGSQRSLLEVMAEFPSAKPPLGVFFAAVTPRLQPRYYSISSSPRFAPQRVHVTCALVYGPTPTGRIHKGICSTWMKNATPLEESRDCSWAPIFIRPSNFKLPVDNSIPIIMIGPGTGLAPFRGFLQERFALKEDGVQLGPALLFFGCRNRQMDFIYEDELKNFVEQGSLSELIVAFSREGPEKEYVQHKMMDKAAYLWSLISQGGYLYVCGDAKGMARDVHRTLHTIVQKQENVDSSKAEAVVKKLQMDGRYLRDVW. 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01629 711 SUPERFAMILY Riboflavin synthase domain-like 287 553 IPR017938 -
Seca4g01629 711 Gene3D - 558 711 IPR039261 -
Seca4g01629 711 PANTHER NITRIC OXIDE SYNTHASE-RELATED 78 711 - -
Seca4g01629 711 Pfam Oxidoreductase NAD-binding domain 565 675 IPR001433 GO:0016491
Seca4g01629 711 FunFam NADPH--cytochrome P450 reductase 355 487 - -
Seca4g01629 711 Gene3D Translation factors 311 556 - -
Seca4g01629 711 ProSiteProfiles Flavodoxin-like domain profile. 82 253 IPR008254 GO:0010181
Seca4g01629 711 Pfam Flavodoxin 84 248 IPR008254 GO:0010181
Seca4g01629 711 Pfam FAD binding domain 306 528 IPR003097 GO:0016491
Seca4g01629 711 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 552 711 IPR039261 -
Seca4g01629 711 CDD CYPOR 307 711 - -
Seca4g01629 711 FunFam NADPH--cytochrome P450 reductase 1 555 711 - -
Seca4g01629 711 SUPERFAMILY Flavoproteins 78 261 IPR029039 -
Seca4g01629 711 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 345 355 IPR001709 GO:0016491
Seca4g01629 711 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 564 583 IPR001709 GO:0016491
Seca4g01629 711 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 637 653 IPR001709 GO:0016491
Seca4g01629 711 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 606 617 IPR001709 GO:0016491
Seca4g01629 711 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 523 532 IPR001709 GO:0016491
Seca4g01629 711 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 660 668 IPR001709 GO:0016491
Seca4g01629 711 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 489 496 IPR001709 GO:0016491
Seca4g01629 711 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 593 602 IPR001709 GO:0016491
Seca4g01629 711 Gene3D - 355 487 IPR023173 GO:0016491
Seca4g01629 711 PRINTS Flavodoxin signature 83 96 IPR001094 GO:0010181
Seca4g01629 711 PRINTS Flavodoxin signature 139 150 IPR001094 GO:0010181
Seca4g01629 711 PRINTS Flavodoxin signature 174 184 IPR001094 GO:0010181
Seca4g01629 711 Hamap NADPH--cytochrome P450 reductase [POR]. 22 711 IPR023208 GO:0003958
Seca4g01629 711 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 309 556 IPR017927 GO:0016491
Seca4g01629 711 PIRSF P450R 17 213 IPR023208 GO:0003958
Seca4g01629 711 PIRSF P450R 217 711 IPR023208 GO:0003958
Seca4g01629 711 Gene3D - 74 265 IPR029039 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01629 Seca-Chr4 26384839 26398306 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01629 K00327 - gmx:100798676 1244.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01629 4 26384839 26398306 Seca4g01629 4 26384839 26398306 ECH
Seca8g01815 8 37201414 37208770 Seca4g01629 4 26384839 26398306 PCT