Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01626 ATGTTACGAAGAGCAGCAACGAATGCATATCCATGGTGGTGGGCAAGCCACATCAGGACAAAGCAATCAAAATGGCTGGAACAAAGCCTCCAAGATATGGAGGAGAAGGTGGCCGAGACCCTCAAAATCATTGATGAAAGTGGGGACTCATTTGCCCAGAGGGCAGAAATGTACTACAGGAAGAGGCCAGAGCTGGTAAGTTTTGTGGAAGAAGCCTTTCGAGCATATAGAGCATTAGCAGAGAGATATGATCATCTGTCAAAGGAGCTTCAAAGTGCCAACCGCACCATTGCCAGTGTCTTCCCAGAACAAGTCCGATATAGAATTGATGAAGATGATGATGAAGAAAGTTTCCTTGGAGCCAATTCATCATCTCCAGACCCCGACAATCAAACACAAAAACCAGGCATCCCAAAAGCACCAAATATCCCAAAGAAGAATTTTAGGAGCAAATCCATGTCACTGTCCAAGAAGGGACCACTTAGGAGGAATGTCAGCTCTGCAAAATCTGTTTCAACAATTCTAAGTTCAGGACTGAGTAAGGATGAAGCACTATCAGAAATAGACAAGCTTCAGAAAGAAATTTTGGCACTACAGACTGAGAAAGAATTTGTAAGAAGCTTGTATGAGCATTCCTATGAAAAGTACTGGAAAATTGAAGACCAGATTACAGGAATGCAAAAAAGAATTTGCAGCTTGCAAGATGAGTTTGGCATTGGTACAGTCATAGAAGATAATGATGCACGGGTTTTAATGGCAGCTACAGCTCTAAATTCATGCAAAGAAACCCTGGCTAAATTGCAAGAGGTGCAAGCTCAATCATCTGAAGAAGCTAAAGCAGCATATGAAAATGTTAAGGAAGCTCATGACAGGTTTGAAACCCTTAGAGACCAATTCATTTCTAAGCATAGGAGTCAGCATGACCAAGGAACAGAACCAAAAAGCATAGATGAAGATCCAGTTAGCTTGGAAGAAGAGATGCATGAGCATGATGTGGGGCTGTTGCGAGAGAGGATTAAGGAAAAGCTTGAGGAAGATTCAGCTAACTCCCTCACTATGACAGAAATGGCAGAGAAGATTGATGAGCTTGTAAATAAGGTTGTTAGCTTGGAAACCGCAGTCACTTCTCAGACTGGCTTGGTAAAAAGACTGAGATCAGAAACAGATGAACTTCAGAAAAATATACAAGGCTTAGAAGAGGACAAGGAAATGTTGATAGAAGATTCAGAAAAAATGAACAAGAAGCTGAAAGAATTGGAGGAGGAATTGAGGAGAGTTAAAAATCTCAACTGGAGTGTCAAAAAGCAAGACAACAGCCTGCAAACACACTTCATTGAAGCTAATTGTAATCTTGAGCATCTTTCAGGAAGCTTGAATAATGTGAAGCTAGATGAGGAGGGGGAGAACTTGGAACTTTATAAGAATAAAAGTGTTCCAGATGGAAAACTAAGAGAGGAGTCTGAAAAGCCAGGTGATAGATTGTCAACTGATAATTTAACAATCATGAATGATGTCAAGACAACAAAGGAGGAGAAGGAAGATTTTGATGCAAATTTCAGTGATGTCAGAAATGAAGATGACACATTTAATTTGAAGGAAAATATTGATTTTAGGACTGAAGGGATTCCACAGATAACACAGCAGGATAAGGATGATTTGTCTGAGACAGTGAGTAATCTTGACAGTGAATCACTTGATCTGGGGACTGGCCAGGAAAAAGATCAACCTACCTGGAGGCAGATGTTTGCAAGTGGATTAGATGACAGAGAAAAGATTCTGTTGGATGAGTACACATCAGTTTTAAAGAACTATAATGATGCAAGGGACAAGCTCAATGATGTGGAGAAGAAAAATCGGGACAGCGTTTTTGAGTTGGCACTTCAGGTAAGGGAATTGAAGGATGTTGTTGCCACTAAGGATAAAGAGATAAACTTTTTACAAGGAAAACTGACTTGTCCAGAAACAAATCCGGATGAAAGTCCTAGCACCATTCTCACAAATTATAAATACACACCACAAGAAGCGCTTCTTCGAAACGCATCTCTAGGAGCTAACATGATGCAGGACCCTGAAACTCCATCTTCAGATATAGTAGATACAAGTGTAGTTAGTAATTCTTTTGCAGAGCAACACCAACCTCTTGAAAACACAGGAAATATTGCCATATCAACAGTACATGCAAGATTATGGAAGGTGAGAGCAAACCTAGTTGATAAGAACCATTCCCTTTCAGCATTGGAAAAGAAATTCCGTTCAGAGATTGATGATTTGCTGGAGGAGAACTTAGAGTTCTGGTTGAGATTTAGCACCTCAGTTCATCAAATTCAAAAGTTCCAAAATTCCATACAAGACCTAAAAGCAGAGCTACGGAACATAAAGGATAGCAATATCATCGAAGGGAACTCAAATTCTATAAAATCAGAAATGAAGCCAATATTTAGAGAACTAAGAGAGATAAGAACCGAGTTATCAGTGTGGTTGGAACACAATGAGTTATTGCAGGACGAGTTGCAAGGTAGGCATCCATCGTTGTGCAGCTTACAAGATGAAATAGCAAGAGCAGCGAATCCTGATTCTGCATTAGAACTGAGTGGTTATCAAGCTGCAAAGTTTCAAGGTGAGGTTCTCAACATGAAACAGGAGAACACCAAGGTTTCAAGTGAACTACAAGCAGGTTTAAGTTTTGTAAAAGGATTGAAAAATGAAGTTGAGAAGATGCTAGAAGAAGTGAGTCAAGCAATTGGGGTTAACAATAACGGGTACGGCCAGGAGAAACACTCCACAAGTCGTGGTAGAATACCGTTGAGGTCTTTCTTGTTTGGAATCAAGTTAAAGAAGCAAAGGCAATCGGTCTTCGCATGTGTCAATCCAACACTACAGAGACAATACAGTGATCTTGCAGAGGCTAATGATGCGCCAATTTAG 2925 0.4027 MLRRAATNAYPWWWASHIRTKQSKWLEQSLQDMEEKVAETLKIIDESGDSFAQRAEMYYRKRPELVSFVEEAFRAYRALAERYDHLSKELQSANRTIASVFPEQVRYRIDEDDDEESFLGANSSSPDPDNQTQKPGIPKAPNIPKKNFRSKSMSLSKKGPLRRNVSSAKSVSTILSSGLSKDEALSEIDKLQKEILALQTEKEFVRSLYEHSYEKYWKIEDQITGMQKRICSLQDEFGIGTVIEDNDARVLMAATALNSCKETLAKLQEVQAQSSEEAKAAYENVKEAHDRFETLRDQFISKHRSQHDQGTEPKSIDEDPVSLEEEMHEHDVGLLRERIKEKLEEDSANSLTMTEMAEKIDELVNKVVSLETAVTSQTGLVKRLRSETDELQKNIQGLEEDKEMLIEDSEKMNKKLKELEEELRRVKNLNWSVKKQDNSLQTHFIEANCNLEHLSGSLNNVKLDEEGENLELYKNKSVPDGKLREESEKPGDRLSTDNLTIMNDVKTTKEEKEDFDANFSDVRNEDDTFNLKENIDFRTEGIPQITQQDKDDLSETVSNLDSESLDLGTGQEKDQPTWRQMFASGLDDREKILLDEYTSVLKNYNDARDKLNDVEKKNRDSVFELALQVRELKDVVATKDKEINFLQGKLTCPETNPDESPSTILTNYKYTPQEALLRNASLGANMMQDPETPSSDIVDTSVVSNSFAEQHQPLENTGNIAISTVHARLWKVRANLVDKNHSLSALEKKFRSEIDDLLEENLEFWLRFSTSVHQIQKFQNSIQDLKAELRNIKDSNIIEGNSNSIKSEMKPIFRELREIRTELSVWLEHNELLQDELQGRHPSLCSLQDEIARAANPDSALELSGYQAAKFQGEVLNMKQENTKVSSELQAGLSFVKGLKNEVEKMLEEVSQAIGVNNNGYGQEKHSTSRGRIPLRSFLFGIKLKKQRQSVFACVNPTLQRQYSDLAEANDAPI. 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01626 974 Coils Coil 181 208 - -
Seca4g01626 974 Coils Coil 278 298 - -
Seca4g01626 974 MobiDBLite consensus disorder prediction 147 164 - -
Seca4g01626 974 MobiDBLite consensus disorder prediction 476 493 - -
Seca4g01626 974 MobiDBLite consensus disorder prediction 113 164 - -
Seca4g01626 974 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 90 IPR011684 GO:0003779
Seca4g01626 974 Coils Coil 594 617 - -
Seca4g01626 974 Coils Coil 353 373 - -
Seca4g01626 974 MobiDBLite consensus disorder prediction 119 137 - -
Seca4g01626 974 Coils Coil 775 795 - -
Seca4g01626 974 PANTHER PROTEIN NETWORKED 2D 1 969 - -
Seca4g01626 974 Coils Coil 381 436 - -
Seca4g01626 974 MobiDBLite consensus disorder prediction 476 496 - -
Seca4g01626 974 Coils Coil 69 96 - -
Seca4g01626 974 Pfam KIP1-like protein 12 84 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01626 Seca-Chr4 26334440 26339248 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01626 - - gmx:100805236 1262.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01626 4 26334440 26339248 Seca4g01626 4 26334440 26339248 ECH
Seca4g01626 4 26334440 26339248 Seca4g01626 4 26334440 26339248 PCT