Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01560 ATGACGGTATTCCACTTCTTTAACTGTGCGATTCTCACCTTCGGCCCTCACGCCGTCTACTATTCCGCCACACCCTTATCTGAGTATGATACACTCGGCACTTCTATAAAAGCTGCTGTTGTTTATCTCGCAACAGCATTAGTGAAGCTCATTTGCCTGGCTACTTTTCTAAAGGTATCAGAGAGTGATAGCTTTGATCCATATCAGGAATTTTTGAAGGCATTAATAGGTTTTATAGATGTTGCTGGGCTTTATTTTGCCTTGACCCAGTTGACTCACAGGAACATCTCTCAAAATCATAAATTTCAAGCAGTTGGACTTGGCTGGGCATTTGCTGATTCTGTACTGCATAGATTGGCTCCACTTTGGGTGGGTGCTAGAGGATTAGAATTTACTTGGGATTACATTTTGCAGGGCCTCGAGGCTAATGCTAATTTGGTGTTGAGCATATCCCTCGCTGCACTGGGATCTTTGATGTGGCTCCGAAAAAATAAACCCAAGACCCTGATTCCTATTATATACTTATGTGCTGGGATTGTAGCAACCATGCCATCTATCACAAGCTATCTGAGGCGGGGATTGGGGTGGCACTTTCCCAAAGTGGTAGGTTTTGAGCTCTTCACATCCTTGGTAATGGCATTTATAAGCTGGCAACTGTTTTCTGCATGTCAGAGACCTTCAGTGTGA 687 0.4381 MTVFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSIKAAVVYLATALVKLICLATFLKVSESDSFDPYQEFLKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRLAPLWVGARGLEFTWDYILQGLEANANLVLSISLAALGSLMWLRKNKPKTLIPIIYLCAGIVATMPSITSYLRRGLGWHFPKVVGFELFTSLVMAFISWQLFSACQRPSV. 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01560 228 Pfam Predicted membrane protein (DUF2053) 2 161 IPR019164 -
Seca4g01560 228 PANTHER SMALL SEVEN TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN 1 226 IPR019164 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01560 Seca-Chr4 25282950 25288819 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01560 K26498 - gmx:100814690 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01560 4 25282950 25288819 Seca4g01560 4 25282950 25288819 ECH