Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01559 ATGGCCATGGCCTCAGCTGTCCTCTGTCCTCAGAACATCACCGGAGCATTGGTGAGCTCGACCAAGAAGAGATTGAACAAAGCGGTATACGTAAAAGGCCTAAATTCATTTGGGGGATTGAAGGCAAGCAATGATGTGATCTCTTTGGGGCTTCCTTTGAGCACTGAGAAGTGCTTTGCTAAGATTGTGAATTCAGTGAAAGCCACAGCTTCAAATGGGAAAGGAAAGGGAGGAGGGGCACTCTCATCGACTTGCAATGCCGCAGGTGAGATATTCACCATTGCTGCTATTATGAATGGACTTGTTCTCGTGGGGGTTGCAGTTGGATTTGTCCTTCTTCGAGTTGAAGCATGGGTGGAGGAGTCTGAGGCAGAGTGA 378 0.4841 MAMASAVLCPQNITGALVSSTKKRLNKAVYVKGLNSFGGLKASNDVISLGLPLSTEKCFAKIVNSVKATASNGKGKGGGALSSTCNAAGEIFTIAAIMNGLVLVGVAVGFVLLRVEAWVEESEAE. 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01559 125 SUPERFAMILY PetM subunit of the cytochrome b6f complex 88 120 - -
Seca4g01559 125 Pfam PetM family of cytochrome b6f complex subunit 7 89 116 IPR012595 GO:0009512
Seca4g01559 125 PANTHER B6F COMPLEX SUBUNIT, PUTATIVE, EXPRESSED-RELATED 1 123 - -
Seca4g01559 125 Hamap Cytochrome b6-f complex subunit 7 [petM]. 87 118 IPR012595 GO:0009512
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01559 Seca-Chr4 25280460 25280837 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01559 - - gmx:100500315 199.904
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01559 4 25280460 25280837 Seca4g01559 4 25280460 25280837 ECH