Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01548 ATGAAATTCAAGTCCTCTCTTGTTGTTGCTCATAATTCAGTTTCAGCCACTTCCAAAATTGGAACAACAATGGAACTCCGTAAATCAGTTAGAAACCAAACCAATGTTTCTCTCAGCATCGCCAAGCATTTATTCTCGAAAGAATCTCAAGACATTAACAAGAACATTGTGTTTTCACCCTTGTCTCTCCACCTTGTGCTTAGCATCATCGCTGCTGGTTCCGAGGGTCCCACACTCCATCAGCTCCTATCCTTCCTCCGATCCAAATCCACCGACCACCTCAACTCCTTCGTCTCTCAGCTCGTCTCCGTTGTCCTCTCCGATGCTGCTCCCGCCGGCGGGCCTCGCATCTCTTTCGCCGATGGTGTTTGGGTTGATCAATCCCTTTCCCTTCTTCCTTCCTTCAAGCAACTTCTGGATACTGATTATAAGGCCACTCTGGCTTCTGTTGATTTCCGTACCAAGGCTGTTGAAGTGACCAATGAAGTGAATTCGTGGGCTGAAAAAGAGACCAATGGCCTTATTAAAGAGGTTCTTCCTCCCGGGTCAGTTAACAGCTTAACCAACCTCATCTTTGCAAATGCACTCTACTTCAAAGGAGCATGGAATGAGAAGTTTGATGCTTCAAAAACAAAACACTATAATTTCCACCTTCTTAATGGAAGCTCAGCCAGGGTTCCCTTCATGTCCAGCAAGAAGAAACAGTTTATTAGTGCTTTTGATGGCTTCAAAGTCCTTGGTCTTCCTTATAAGCAAGGTGAAGATAAGCGTCGGTTTTCTATGTACATTTTTCTTCCAGATGCAAAAGATGGGCTGCCAGCTTTGGTTGAGCAGGTGGCTTCTGAATCTGGGTTCCTGGAACGTAGTCTTCCTTATCAAAAAGTGGAAGTGGGTGACTTCAGGATTCCGAGATTCAATATTTCTTTTGGGTTTGAAACTTCTGATGTTCTGAAGGAGCTGGGACTGGTGTTGCCTTTCTCTGTTCATGGAAATTTGTCAAAAATGGTGGACTCTCCTGAGGGTCAAAACCTATATGTTCAATACATATTTCACAAGTCGTTCATTGAAGTAAATGAAGAAGGCACTGAAGCTGCAGCGGCTACTGCTGCTGTCATGCTATATGGGTGTTGCCCGGGCATTCCAACTCATATAGACTTTGTAGCAGATCACCCTTTCTTGTTCGTGATCAGAGATGATTTAACCGGAATAGTACTCTTTATTGGGCAGGTGCTCAATCCTCTTGCTGGATGA 1251 0.4452 MKFKSSLVVAHNSVSATSKIGTTMELRKSVRNQTNVSLSIAKHLFSKESQDINKNIVFSPLSLHLVLSIIAAGSEGPTLHQLLSFLRSKSTDHLNSFVSQLVSVVLSDAAPAGGPRISFADGVWVDQSLSLLPSFKQLLDTDYKATLASVDFRTKAVEVTNEVNSWAEKETNGLIKEVLPPGSVNSLTNLIFANALYFKGAWNEKFDASKTKHYNFHLLNGSSARVPFMSSKKKQFISAFDGFKVLGLPYKQGEDKRRFSMYIFLPDAKDGLPALVEQVASESGFLERSLPYQKVEVGDFRIPRFNISFGFETSDVLKELGLVLPFSVHGNLSKMVDSPEGQNLYVQYIFHKSFIEVNEEGTEAAAATAAVMLYGCCPGIPTHIDFVADHPFLFVIRDDLTGIVLFIGQVLNPLAG. 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01548 416 Gene3D - 202 408 IPR042185 -
Seca4g01548 416 FunFam Predicted protein 53 235 - -
Seca4g01548 416 CDD serpinP_plants 31 413 - -
Seca4g01548 416 PANTHER SERINE PROTEASE INHIBITOR, SERPIN 33 413 IPR000215 GO:0004867|GO:0005615
Seca4g01548 416 Gene3D Antithrombin, subunit I, domain 2 53 359 IPR042178 -
Seca4g01548 416 SUPERFAMILY Serpins 17 413 IPR036186 -
Seca4g01548 416 ProSitePatterns Serpins signature. 386 396 IPR023795 -
Seca4g01548 416 Pfam Serpin (serine protease inhibitor) 33 413 IPR023796 -
Seca4g01548 416 SMART serpin2 38 413 IPR023796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01548 Seca-Chr4 24999530 25002021 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01548 K13963 - gmx:100806180 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01548 4 24999530 25002021 Seca4g01548 4 24999530 25002021 ECH