Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01540 ATGCCATCTGTGCATTCTAGCCCTTGCTACCCAATGGAAAATCCTGCAATAGCATCATTACTCCGCCATACATCAGGAGAGAAGAGGAGCAAATTCTCCACTGGTGGACTCCTGAAGATGTTCAAGCTCTTTCCTATGTTAACCTCTGGCTGCAAAATGGTTGCACTATTGGGAAGACCAAGGAAGCCTATGCTCAAAGACAGTGCCACCACAGGGACAATTTTTGGTTACCGCAAAGGGAGAGTGAGTCTTGCTATACAAGAAGATACTCGCCAAATGCCAATTTTTCTTATAGAGCTACCAATGCTTACTAGTGCTTTGAACAAGGAAATGGCCTCTGATATAGTGAGGATTGCCCTGGAGAGTGAGACAAAAACGAATAAGAAGAAGTTAATGGAGGAGTTTGTGTGGGCAGTGTATTGTAATGGAAGAAAAGTTGGGTACTCAATAAGGAGGAAACAGATGAGTGATGAAGAGCTTCATGTTATGCAACATTTGAGAGGTGTGTCTATGGGAGCAGGGGTGCTTCCAAGTGTGTCTGAGAAGGAATATTCAGATGGAGAAATGACTTACATGAGGGCTAGATTTGAGAGAGTGGTTGGTTCTAAGGATTCTGAAGCTTTGTATATGATAAATCCAGATGGTGCTCAAGGTCCAGAGTTTAGTATCTTCTTTTTTAGAGCTCACTAG 690 0.429 MPSVHSSPCYPMENPAIASLLRHTSGEKRSKFSTGGLLKMFKLFPMLTSGCKMVALLGRPRKPMLKDSATTGTIFGYRKGRVSLAIQEDTRQMPIFLIELPMLTSALNKEMASDIVRIALESETKTNKKKLMEEFVWAVYCNGRKVGYSIRRKQMSDEELHVMQHLRGVSMGAGVLPSVSEKEYSDGEMTYMRARFERVVGSKDSEALYMINPDGAQGPEFSIFFFRAH. 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01540 229 NCBIfam uncharacterized plant-specific domain TIGR01570 70 227 IPR006460 GO:0010274
Seca4g01540 229 Pfam Protein of unknown function, DUF617 71 227 IPR006460 GO:0010274
Seca4g01540 229 PANTHER PROTEIN MIZU-KUSSEI 1 27 227 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01540 Seca-Chr4 24884359 24885048 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01540 - - mtr:11420891 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01540 4 24884359 24885048 Seca4g01540 4 24884359 24885048 ECH