Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01530 ATGGATTTGATATTTTCAGCAACAGGAAAGGTTTTGGCTACAGAACTTCCCAAGATTAGAAATAAATCCACCGTTCTATATCCTGCTTCTGCAAAGGCTAGCAATGAGATTGAGGAAGGGCTTTCAAATCGTGGATTTGAAGTTACTAGGATGAATACATATTCAACGATACCAGTTCAACATGTTGACCATATGGTTCTAAAGCAAGCTCTTGCTGCCCCTGTTGTTACAGTAGCTTCACCATCTGCAATTCGTGCCTGGAAGAATCTTCTTTCAGATTCAGATTGGAGCAATTCTGTTGCATGCATTGGTGAGACAACTGCTGCAATGGCAAGAGGATTAGGCTTCAGAAATGTGTACTACCCAACACAACCAGGCCTTGAAGGCTGGGTTGAAAGCATTCTTGAAGCATTAAGATCGTATGATGAATTATTGAGGTAG 441 0.4127 MDLIFSATGKVLATELPKIRNKSTVLYPASAKASNEIEEGLSNRGFEVTRMNTYSTIPVQHVDHMVLKQALAAPVVTVASPSAIRAWKNLLSDSDWSNSVACIGETTAAMARGLGFRNVYYPTQPGLEGWVESILEALRSYDELLR. 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01530 146 PANTHER UROPORPHYRINOGEN-III SYNTHASE, CHLOROPLASTIC 7 140 IPR039793 GO:0004852|GO:0006780
Seca4g01530 146 SUPERFAMILY HemD-like 8 139 IPR036108 GO:0004852|GO:0033014
Seca4g01530 146 Gene3D - 2 48 IPR036108 GO:0004852|GO:0033014
Seca4g01530 146 Pfam Uroporphyrinogen-III synthase HemD 7 132 IPR003754 GO:0004852|GO:0033014
Seca4g01530 146 CDD HemD 8 134 IPR003754 GO:0004852|GO:0033014
Seca4g01530 146 Gene3D - 49 139 IPR036108 GO:0004852|GO:0033014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01530 Seca-Chr4 24718704 24721436 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01530 K01719 - gmx:100808086 245.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01530 4 24718704 24721436 Seca4g01530 4 24718704 24721436 ECH