Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01491 ATGGAGTCGCAGGGACAGTGGAACCCGCTTCTATCGTTTACCAGGTTCGTCCATCAACACTGCGTCCATCTTGCTACTCGTTTGGAGGATACCAAGCGACTCGCTGGAACCCTAGTTCAAGCTCATGCTAATCCTCTACTTGCACTCACTCGCCCCAAACATGCCCTCGCTGCTACTTTGAGTTCCCAGCACGTTGCTAAGTCCCTTGTCGGCACCTCAGTTTACACCGTCAGCAATTCCAACAATGAGTTTGTTCTCATTTCTGATGCCGACGGTTCCAAGTCCATTGGATTGCTTTGCTTTCGCCAAGAAGACGCCGAAGCATTCCTTGCTCAAGTTCGATCGCGGAAAAGAGAACTTCGAGGAAACGCTAGGGTTGTCCCCATAACTCTTGACCAGGTATACATGTTGAAGGTTGAAGGTATTGCATTCCGATTTTTACCTGATCCAATTCAAATAAAGAATGCTTTGGAGCTTAGACCAGCCAGTAAGGAAGGTTTTGATGGAGTTCCTGTCTTTCAGTCAGACCTTTTGGTTGTGAAGAAGAAGAATAAGCGTTACTGCCCTGTATATTTCTCTAAGGAAGATATTGAGCAGGAACTGGGCAAAATTTCCAGGGCATCTAGAGGACCTGGAGTTTCTCAGCATATAATGGTATAG 660 0.4667 MESQGQWNPLLSFTRFVHQHCVHLATRLEDTKRLAGTLVQAHANPLLALTRPKHALAATLSSQHVAKSLVGTSVYTVSNSNNEFVLISDADGSKSIGLLCFRQEDAEAFLAQVRSRKRELRGNARVVPITLDQVYMLKVEGIAFRFLPDPIQIKNALELRPASKEGFDGVPVFQSDLLVVKKKNKRYCPVYFSKEDIEQELGKISRASRGPGVSQHIMV. 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01491 219 Pfam Tic22-like family 10 219 IPR007378 GO:0015031
Seca4g01491 219 PANTHER PROTEIN TIC 22, CHLOROPLASTIC 17 219 IPR007378 GO:0015031
Seca4g01491 219 FunFam Protein TIC 22, chloroplastic 64 165 - -
Seca4g01491 219 Gene3D - 63 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01491 Seca-Chr4 24137984 24143098 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01491 - - gmx:100802935 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01491 4 24137984 24143098 Seca4g01491 4 24137984 24143098 ECH