Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01483 ATGGCTATATCAAATCCTTGTGTTTTCAATAAACATAAATGCCCCTTGAATCACAACCATTTATCTTGTCTGGAAAGGATGCCGCATGTTGTCATTCAAGGACACGGACACAATGTTCTGTATAGCAGTTCCTTTGTCAGTGTCAGACTAGAGCTATTCTTTCAGAAACCAGTTGAATCTAGAATTTCCCATGTAGTTTTCAGTTTGGTTCCTAGGCACAGTCATGGCAAACTTTGTCTTGGTGGGACAGAAATTGAACCTGTAATGAAAATCAGGCAAACATTCTGCCCTGGTAAGATAAGAGTTGCAGAAGAATATCAAGATTTGTCTGATGAGGAAGAGGATCTATGTCCTGTTGAATGTGTAAGAGAATTCAAGACTGATGAAGAGTTCTGCAGAATTCTGGATAAGGCTAAAGGAACTGGATCTTTGGTTGTGGTAGATTTCTTCCGCACCTCTTGTGGAAGTTGCAAGTATATAGAGCAGGGTTTTGCAAAATTGTGCAAGAAATCTGGTGACCATGAAGCTCCAGTAATCTTTCTAAAGCATAATGTAATGGATGAGTATGATGAGCAATCCGAGGTTGCTGAGCGACTTAGAATCAGGGCCGTGCCACTTTTCCATTTCTACAAAGATGGGATCCTGTTGGAAGCATTCCCAACCAGAGACAAAGATAGGATTATTGCAGCCATCCTCAAGTACTCATCTCTTCAAGCCGAAGATATTTTGAGTTAA 735 0.4054 MAISNPCVFNKHKCPLNHNHLSCLERMPHVVIQGHGHNVLYSSSFVSVRLELFFQKPVESRISHVVFSLVPRHSHGKLCLGGTEIEPVMKIRQTFCPGKIRVAEEYQDLSDEEEDLCPVECVREFKTDEEFCRILDKAKGTGSLVVVDFFRTSCGSCKYIEQGFAKLCKKSGDHEAPVIFLKHNVMDEYDEQSEVAERLRIRAVPLFHFYKDGILLEAFPTRDKDRIIAAILKYSSLQAEDILS. 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01483 244 CDD TRX_family 135 231 - -
Seca4g01483 244 ProSiteProfiles Thioredoxin domain profile. 80 236 IPR013766 -
Seca4g01483 244 SUPERFAMILY Thioredoxin-like 103 234 IPR036249 -
Seca4g01483 244 PANTHER THIOREDOXIN-LIKE 4, CHLOROPLASTIC 102 240 IPR044176 -
Seca4g01483 244 FunFam Thioredoxin-like 4, chloroplastic 102 238 - -
Seca4g01483 244 Pfam Thioredoxin 127 231 IPR013766 -
Seca4g01483 244 Gene3D Glutaredoxin 98 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01483 Seca-Chr4 24022071 24024790 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01483 - - gmx:100812907 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01483 4 24022071 24024790 Seca4g01483 4 24022071 24024790 ECH