Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01415 ATGGGGAGTTCCAATACAGCTTCTCCTGGGGTTACCGACAATTCCAGTAGCAGCACTCAGTCTGAAACCGAAAATCGTATCCCTCCCGTTGCTCCTTACGCTCAAGAAGAAAAGGTCTTCGCCTATCACACTAGTTGTCTTTATGAAGCCAAGATTAGGCAAGTCGAATACAAGCATAGTCAATGGAGGTTCTTGGTTCATTATCTTGTAAGCATGTCTGCATTTTTCTCCTCAACATTCCTCCCAATAAAGTTATTTTGTTTATATTTAGATTGGGATGAATGGGTTGGTGTGGACCGTTTGATGAAACACACGGATGAGAATATGCGCAAGAAAGTTGCCCTTGATGAGAAATTCGGCAATGACAAGAATGGGAAAATTCTCCGTGCATCACTCACTAAATCCAAGAGTACTAACGTAGCAAGAGGCAGGAAACGAAAGAATGAATCTCTGATTAAGGGAAAACCTGCTGTTCATCCTGATAAGCTTGTCAGTATTCAGATGCCACCAACACTAAAGAAGCAATTGATTGATGATTATGAGTTTATTACCCATCTGGGCAAGCTTGTTAAACTTCCACGTACTCCTAATGTCAACGACATATTGAAGAACTACTTTGATTACAGATTAAAGAAATGTGGCTCGATAGCTGATTCTGTTGAAGAAATTATGAAAGGATTATGTTGTTACTTTGACAAAGCACTACCAGTGATGCTCTTGTACAAGAATGAACGTCAGCAGTACCAAGAAGCTTGTCCAGATAATATCTCTCCTTCTGCTATATATGGTGCTGAGCATTTGTTACGTCTCTTTGTTAAGTTGCCGGAATTATTGTTACATGCTAGCATTGAAGAGGAGACATTGATAGAACTTCAGGCACAATTATTTGACTTTCTCAGGTTCTTGCAAAAAAATCAGAGCACATTTTTCCTTTCTACTTATCATGTCCCAGAAGATATCGAGAACAGCACCAACAAACAAGGTGACTAG 990 0.398 MGSSNTASPGVTDNSSSSTQSETENRIPPVAPYAQEEKVFAYHTSCLYEAKIRQVEYKHSQWRFLVHYLVSMSAFFSSTFLPIKLFCLYLDWDEWVGVDRLMKHTDENMRKKVALDEKFGNDKNGKILRASLTKSKSTNVARGRKRKNESLIKGKPAVHPDKLVSIQMPPTLKKQLIDDYEFITHLGKLVKLPRTPNVNDILKNYFDYRLKKCGSIADSVEEIMKGLCCYFDKALPVMLLYKNERQQYQEACPDNISPSAIYGAEHLLRLFVKLPELLLHASIEEETLIELQAQLFDFLRFLQKNQSTFFLSTYHVPEDIENSTNKQGD. 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01415 329 Pfam MRG 155 314 IPR026541 -
Seca4g01415 329 MobiDBLite consensus disorder prediction 1 26 - -
Seca4g01415 329 FunFam Chromatin modification-related protein EAF3 160 323 - -
Seca4g01415 329 PIRSF EAF3_MRG15 27 327 IPR008676 GO:0005634|GO:0006325|GO:0006355
Seca4g01415 329 SUPERFAMILY Chromo domain-like 31 115 IPR016197 -
Seca4g01415 329 SUPERFAMILY Chromo domain-like 92 184 IPR016197 -
Seca4g01415 329 ProSiteProfiles MRG domain profile. 160 327 - -
Seca4g01415 329 PANTHER MORTALITY FACTOR 4-LIKE PROTEIN 32 318 IPR008676 GO:0005634|GO:0006325|GO:0006355
Seca4g01415 329 Gene3D - 15 131 - -
Seca4g01415 329 Gene3D MRG domain 160 327 IPR038217 -
Seca4g01415 329 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01415 Seca-Chr4 22768153 22771605 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01415 K11339 - gmx:100777259 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01415 4 22768153 22771605 Seca4g01415 4 22768153 22771605 ECH