Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01414 ATGAAGCGTCCTCTTCCTCCGTCAACGGGTGAGGATAGGAAGATGAAAAAGGTGAAGGGGGCAGAAAGCGATGATGAAGAGGGTGATGGGGTTTGTGGGAAGACTCGTGGACTTGCGTATTTTGATGACAATTTGCTGTTCGAGGTGTTGAAGCACGTGGATGCGAAGACGCTGGCTATGGCGGGTTGCGTGAACAAGCAGTGGTACAAGACAGCGCAGGATGAGAGGCTTTGGGAGCTGATCTGCACCAAACAGTGGGCTAACACTGGTTGTGGTGAGCAACAGCTACGATCCGTTGTCCTTGCTCTTGGTGGGTTCCGTCGTCTTCATTCGCTTTGTCTTTTGCCTCTTTCCAAGCCTCAAACATCATCATCATCATCTTCTTCTTCTTCATCATCCTCATCCTCATCGCCTTGGGGTCCCATACCCCAGGTGATTAGGCCCAACTCTAAGCCACAACCTCGTTTGGGGAAAGACGAGGTTCATGTCTCTCTCTCCCTTCTCTCTATTCGGTACTATGAGAAGATGAATTTCAATAACAGAAACAGATGA 552 0.4946 MKRPLPPSTGEDRKMKKVKGAESDDEEGDGVCGKTRGLAYFDDNLLFEVLKHVDAKTLAMAGCVNKQWYKTAQDERLWELICTKQWANTGCGEQQLRSVVLALGGFRRLHSLCLLPLSKPQTSSSSSSSSSSSSSSSPWGPIPQVIRPNSKPQPRLGKDEVHVSLSLLSIRYYEKMNFNNRNR. 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01414 183 PANTHER F-BOX PROTEIN SNE 42 179 IPR044184 GO:0009937|GO:0019005
Seca4g01414 183 MobiDBLite consensus disorder prediction 118 143 - -
Seca4g01414 183 Pfam F-box domain 44 79 IPR001810 GO:0005515
Seca4g01414 183 Gene3D - 34 139 - -
Seca4g01414 183 CDD F-box_AtGID2-like 41 82 - -
Seca4g01414 183 SUPERFAMILY F-box domain 39 87 IPR036047 GO:0005515
Seca4g01414 183 FunFam F-box protein GID2 27 139 - -
Seca4g01414 183 MobiDBLite consensus disorder prediction 1 30 - -
Seca4g01414 183 MobiDBLite consensus disorder prediction 118 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01414 Seca-Chr4 22762743 22763294 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01414 K14495 - gmx:100527591 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01414 4 22762743 22763294 Seca4g01414 4 22762743 22763294 ECH