Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01390 ATGTACTACTGGTGTGCCTTGTCCTTAGCTCCTCTTTGTTGGAAGTCTCAATGGCTACTTCAGGCTTTCTGTGACACCAAATGCTCACAGAGGTGTTCCAAAGCTTCGATTCAGGACAGATGTTTGAAGTTTTGCGGGATCTGCTGCCAGAAGTGTAACTGCGTGCCATCTGGGACTTATGGGAACAAGCATGAGTGTCCTTGCTACAGGGACTTGAAGAACAACAAGGGAAAAAGCAAATGCCCTTAA 249 0.4659 MYYWCALSLAPLCWKSQWLLQAFCDTKCSQRCSKASIQDRCLKFCGICCQKCNCVPSGTYGNKHECPCYRDLKNNKGKSKCP. 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01390 82 Pfam Gibberellin regulated protein 23 82 IPR003854 -
Seca4g01390 82 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 16 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01390 Seca-Chr4 22456795 22457667 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01390 - - lja:Lj1g3v1708960.1 135.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01390 4 22456795 22457667 Seca8g07721 8 174485404 174486922 ECH
Seca4g01390 4 22456795 22457667 Seca4g01390 4 22456795 22457667 ECH
Seca4g01390 4 22456795 22457667 Seca4g01390 4 22456795 22457667 PCT