Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01387 ATGAGCTGGTGGTGGTCTGGAGCTATTGGCGCTGCCAAGGCAAGCAATCCCTCACTCTCCCATCACAAGAAATTAGAGGAAGATGAAGCGCCGCGAACCTTCCAAAGCGTGGGATTGGTGATCGGTATCACAGGCATCGTTGGCAACAGCCTAGCCGAGATTCTACCTCTTGCCGACACTCCAGGTGGTCGATGGAAAGTCTACGGAGTCGCACGGCGTCCCCGACCGTCGTGGAACGCCGATCACCCCGTCGAATACATCCAGTGCGACATCTCCGATCCCAACGACGCCCAAGCAAAACTCTCCGTTTTGACGGACGTCACTCACATCTTCTACGTCTGTTGGACTAACCGTCCCACCGAGGTTGAGAATTGCGATGTTAACGGCGCAATGCTCAGGAACGTCCTACGCGCCGTTATCCCAAACGCTCCCAATCTCCGCCACGTGTCCCTCCAGACAGGTGGCAAGCATTACGTTGGACCCTTCGACCTGATCGGCAAGATTAATTTCCACGAGCCGCCATTCACGGAGGATCTGCCGCGTTTGGATGCTCCCAATTTCTATTACACTCAGGAGGATATCTTGTTCGAAGAGACCGCAAAGAAAGAGGGTTTGACATGGTCTGTTCACAGACCTCAAGTCATCTTCGGTTTCTCCCCTTATAGCTTGATGAACCTGATTGGCACGCTTTGCGTTTACGCTGCTATTTGCAAGCACGAGGGTGTTCCCTTGAGATTTCCTGGTACAAAGGGAGCGTGGGAATCTTATTCTGCGGCTTCTGATGCGGATTTGATTGCGGAGCAGCATATTTGGGCTGCGGTGGATCCCTATGCGAGGAATGAAGCCTTCAATTGCAGTAACGGAGACGTGTTCAGGTGGAAGCATCTTTGGAAGGTTTTGGCGGAACAGTTTGGGATTGAGGAATATGGGTACGAGGAGGGTTCGCATTTGAAGTTGTCGGAACTGATGAAGGATAAGGGACCTGTCTGGGATGAGATTGTGAGGGAGAATCAGCTGCAACCTACGAAGCTTGAAGAGGTTGGTGAGTGGTGGTTTGGGGATCTTATACTTGCAGGGGAGGGCATTTTGGATAGCATGAACAAGTCCAAAGAGCATGGCTTTTTGGGATTCAGGAACAGCAAGAATTCCTTCATATCTTGGATAGATAAGACCAAAGCTTACAAGATTGTGCCTTGA 1197 0.5121 MSWWWSGAIGAAKASNPSLSHHKKLEEDEAPRTFQSVGLVIGITGIVGNSLAEILPLADTPGGRWKVYGVARRPRPSWNADHPVEYIQCDISDPNDAQAKLSVLTDVTHIFYVCWTNRPTEVENCDVNGAMLRNVLRAVIPNAPNLRHVSLQTGGKHYVGPFDLIGKINFHEPPFTEDLPRLDAPNFYYTQEDILFEETAKKEGLTWSVHRPQVIFGFSPYSLMNLIGTLCVYAAICKHEGVPLRFPGTKGAWESYSAASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFRWKHLWKVLAEQFGIEEYGYEEGSHLKLSELMKDKGPVWDEIVRENQLQPTKLEEVGEWWFGDLILAGEGILDSMNKSKEHGFLGFRNSKNSFISWIDKTKAYKIVP. 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01387 398 FunFam Iridoid synthase 34 398 - -
Seca4g01387 398 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 39 308 IPR036291 -
Seca4g01387 398 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE 34 398 - -
Seca4g01387 398 CDD 5beta-POR_like_SDR_a 37 337 - -
Seca4g01387 398 Gene3D - 36 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01387 Seca-Chr4 22372812 22374073 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01387 K22419 - gmx:100813467 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01387 4 22372812 22374073 Seca4g01387 4 22372812 22374073 ECH