Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01353 ATGGTGTTTGGACAAGTAGTAATTGGTCCTCCTGGTTCTGGTAAAACAACTTACTGCAATGGCATGTCTCAATTCCTCAATCTTATTGGAAGGAAAGTTGCTGTAATCAATTTGGATCCCGCAAATGATTCATTACCCTATGAATGTGCTGTTAACATTGAGGATCTCGTGAAACTTAGTGATGTTATGGTGGAACACTCTCTTGGTCCAAATGGGGGTCTTGTGTATTGTATGGATTATCTAGAGAAAAATATTGACTGGCTGCAAGCAAAATTAGAACCTCTTCTGAAAGATCACTACCTACTCTTTGATTTTCCTGGCCAAGTGGAACTATTTTTTCTTCATTCAAATGCCAAGAATGTCATCATGAAACTCATAAAGAAATTGAATCTAAGGTTAACTGCAGTGCATTTGGTTGATGCCCATCTTTGCAGTGACCCTGGGAAGTATATTAGTGCATTGCTTCTATCCTTATCCACAATGCTACATCTAGAACTTCCCCACATAAATGTCTTGTCAAAAATTGATTTAATTGAGAGTTATGGAAGACTAGCCTTTAACCTTGATTTCTATACGGATGTGCAAGACTTGTCATATTTGCAATACCATCTTGATCAAGATCCTCGCTCTGCTAAGCACAGGTGTGATATATCGTGTGGAGATTCTTTGCCTACTATGCTAAAGCTCACAAAGGAATTGTGTGAAGTTATTGAGAACTTTGGTCTTGTGAATTTTACAACATTAGATATTCAGGACAAAGAGAGTGTAGGGAATTTAGTGAAACTGATAGACAAAAGCAATGGTTATATATTTGCTGGCATAGAAGCAAGTGCAATTGAATTTAGCAAGATTGCAGTTGGTCCTCTTGATTGGGACTACTATAGATATCCTTGTTTTCTCTGGTGTCTATTTTGA 915 0.3749 MVFGQVVIGPPGSGKTTYCNGMSQFLNLIGRKVAVINLDPANDSLPYECAVNIEDLVKLSDVMVEHSLGPNGGLVYCMDYLEKNIDWLQAKLEPLLKDHYLLFDFPGQVELFFLHSNAKNVIMKLIKKLNLRLTAVHLVDAHLCSDPGKYISALLLSLSTMLHLELPHINVLSKIDLIESYGRLAFNLDFYTDVQDLSYLQYHLDQDPRSAKHRCDISCGDSLPTMLKLTKELCEVIENFGLVNFTTLDIQDKESVGNLVKLIDKSNGYIFAGIEASAIEFSKIAVGPLDWDYYRYPCFLWCLF. 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01353 304 Gene3D - 4 277 IPR027417 -
Seca4g01353 304 Pfam Conserved hypothetical ATP binding protein 7 268 IPR004130 -
Seca4g01353 304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 268 IPR027417 -
Seca4g01353 304 PANTHER XPA-BINDING PROTEIN 1-RELATED 1 273 IPR004130 -
Seca4g01353 304 FunFam GPN-loop GTPase 2 4 278 - -
Seca4g01353 304 CDD GPN2 3 265 IPR030231 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01353 Seca-Chr4 21912366 21920268 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01353 K24104 - ini:109148104 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01353 4 21912366 21920268 Seca4g01353 4 21912366 21920268 ECH