Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01338 ATGTCATGGTTGGCTCGTTCCCTGGCAAACTCTCTCCGACTCGATGGCGACGGAGACGATGAAAACGACATCGTACTCGACTCTCCAACTACGTCATCGAGAAACCACCCACAACAGCAACATCAAATTCAACCACAAGAAAATGCACTTGGATCAGAAGATGATGATGAAACGCAAGGCCGTGGAGTCAAAGAGGACCTTGACGAAATCAAGCAAACCCTAACCCGTCAATTCTGGGGAATGGCCTCTTACCTCGCTCCACCTCCAACAGCTTCCCAAAATGAAGAACAACGACTCGATGAAGCTGCAATTTCCAATAAATCTTCGGACATGGAACAAGGAGCGCGGAAGGATGGCCCTGACCCGAATTCAATTCCGTTTGGATCCGATTCGGAAGGGAATGAGGAACCGGAATGTGATCTCGATCGCGCGGTTGGAATTACAGAGGAGGTATTGACCTTCGCCATGAATATCGCCATGCATCCCGAGACGTGGTTGGATTTTCCTATTGAGGAGGAAGACGACACCGACGATTTCGACATGTCCGATGCCCAACTAGATCATGCTGCAGTTATTGAAAGATTTGCTCCTAGATTAGCTGCGCTCAGAATTGAACTATGTCCTTGCCATATGAGTGAAAGTTACTTCTGGAAAGTCTATTTTGTGCTTCTACATTCAAGGCTTAATAAACAAGATGCAGAGATTTTGTCTACACCCCAGGTCAGTTACATGGCAATCTGCCGTGGCTTTTTTATCACTCTTGTAATCTCCTCAAACATGTTGTCCATGAAGTAA 795 0.4654 MSWLARSLANSLRLDGDGDDENDIVLDSPTTSSRNHPQQQHQIQPQENALGSEDDDETQGRGVKEDLDEIKQTLTRQFWGMASYLAPPPTASQNEEQRLDEAAISNKSSDMEQGARKDGPDPNSIPFGSDSEGNEEPECDLDRAVGITEEVLTFAMNIAMHPETWLDFPIEEEDDTDDFDMSDAQLDHAAVIERFAPRLAALRIELCPCHMSESYFWKVYFVLLHSRLNKQDAEILSTPQVSYMAICRGFFITLVISSNMLSMK. 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01338 264 Gene3D BSD domain 139 238 IPR035925 -
Seca4g01338 264 ProSiteProfiles BSD domain profile. 173 228 IPR005607 -
Seca4g01338 264 MobiDBLite consensus disorder prediction 1 63 - -
Seca4g01338 264 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 241 - -
Seca4g01338 264 MobiDBLite consensus disorder prediction 106 138 - -
Seca4g01338 264 SMART wurzfinal6 176 228 IPR005607 -
Seca4g01338 264 MobiDBLite consensus disorder prediction 25 49 - -
Seca4g01338 264 Pfam BSD domain 176 232 IPR005607 -
Seca4g01338 264 SUPERFAMILY BSD domain-like 146 233 IPR035925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01338 Seca-Chr4 21509297 21512205 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01338 144 228 EF-hand Containing Proteins AT1G69030 27.835 1.17e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01338 - - gmx:100794286 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01338 4 21509297 21512205 Seca4g01338 4 21509297 21512205 ECH