Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01286 ATGGGAAAATTCAAGGCTGGAATCTTGTTGCTTTGCGTGTTTGCTGTCTCGTGTACCAGACTACTAGTATTGAAAGTTGAAGCCAGATCAGCATCATCGCCTTTAGAAATAGACATCGAAGACAGGTTGAAGCTCCTCAACAAGCCTGCTGTAAAAACCATTAAGAGCAAGGATGGGGATATTATTGACTGCGTCGACATCCACAAACAACCTGCTTTTGACCTTCCTGCCTTAAAAAACCACACAATTCAGGTACTATGTCATTATCGATTTGTTTCCTATGAGGTATTTTTGCTAGAATCCCAGAATTCAAGTACAAGAGATGGTTCCCAGTCAAATCCTACGGTGTTTCAGACATGGCAGAAAAGTGGAAGTTGTCCAAAAGGAACAGTCCCCATCCGCAGAATTCTAAAGGAGGACTTACTGAGAGCTGCTTCTCTTGATCGCTTCGGAAGAAAACCTGCGGAACGGCTCATGAATTCAACAAACTTTGATTCCCCCAAATCCATTGGCATCGATCTAGCTGCATTACTTATGGCGACGGGATCCAATTATATAGGTGCAGAAGCAGACATTAATGTTTGGAATCCAAAAGTTGAACTTCCAGATGATTTCACCACTGCTCAAATTTGGGCTAAGGCTCGCAATGGTATTGATTTTGAAAGCATCGAAGCAGGATGGGTGGTGAATCCAAAGTTATATGGTGACACAACCACCCGGCTTTTTGCCTACTGGACTAAGGATTCATACCGGTCAACGGGTTGCTTTGATCTTACTTGCTCTGGGTTTGTGCAAACAGGCACCCAAATAGCGCTTGGTGCTCCCGTAAGATCTGTGTCATCCGAATCTGGCCAGCAGTATATTTTCGATGCTGGAATATTCTTGGATGAATCAGGGAATTGGTGGCTTAAAATACTGCACAACGTCCCTATAGGATATTGGCCCGCTGAATTATTCGACTCTCTGAAACACAGCGCCACAGTGGTTGAATGGGGTGGACAAGTGTTTAGTTCGAAGGTAAAATCAAACAGCCCTCACACGGGAACAGGGATGGGAAGTGGAGATTTCGCAAATGGTACAGCGGGGCACTCATGCTTCATGCTCAATGTGAGGGTTATGGATTATTCGATGCAACTTAAGTACCCTGAAAATGTAACAGCAGCAACTGAAGAACCCAACTGTTACAGTGTTCTCAATAATGTTGGACAAGGAACAGAACCTGTCTTCTATTTTGGAGGGCCCGGACGAAGACCTCCCTATTGTCCTTGA 1269 0.4444 MGKFKAGILLLCVFAVSCTRLLVLKVEARSASSPLEIDIEDRLKLLNKPAVKTIKSKDGDIIDCVDIHKQPAFDLPALKNHTIQVLCHYRFVSYEVFLLESQNSSTRDGSQSNPTVFQTWQKSGSCPKGTVPIRRILKEDLLRAASLDRFGRKPAERLMNSTNFDSPKSIGIDLAALLMATGSNYIGAEADINVWNPKVELPDDFTTAQIWAKARNGIDFESIEAGWVVNPKLYGDTTTRLFAYWTKDSYRSTGCFDLTCSGFVQTGTQIALGAPVRSVSSESGQQYIFDAGIFLDESGNWWLKILHNVPIGYWPAELFDSLKHSATVVEWGGQVFSSKVKSNSPHTGTGMGSGDFANGTAGHSCFMLNVRVMDYSMQLKYPENVTAATEEPNCYSVLNNVGQGTEPVFYFGGPGRRPPYCP. 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01286 422 Pfam Neprosin 203 414 IPR004314 -
Seca4g01286 422 Gene3D - 192 309 - -
Seca4g01286 422 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 39 416 - -
Seca4g01286 422 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Seca4g01286 422 Pfam Neprosin activation peptide 53 159 IPR025521 -
Seca4g01286 422 MobiDBLite consensus disorder prediction 104 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01286 Seca-Chr4 20254953 20259894 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01286 - - gmx:100804570 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01287 4 20291470 20297233 Seca4g01286 4 20254953 20259894 PCT