Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01248 ATGACTGAACCATCTTCCAAACCCAACGGTGCAATTAACGGCGCTGCCGCCACCAACGGCAATCCAGGCCCAATTAAATCCCAACTTTATAACCCAAACCGTCAAGTTTACCGGCCTCAACAATACCACCGCCGTCAACGCTCTCACCGTAACCTCTGCTGTTGCTGCTGTTTCTGGACGATTCTCACCCTCCTCGCCGCCGCACTTCTCGCCGCGATTGTCGGTGCTGCACTCTATGTCCTCTACCGCCCTCACCAACCTCAATTCTCCATCACAAACCTCCGCATTGCCAAGATGAACCTCACAACTTCCAACGACTCACCTTCTCACCTCACCACACTCTTCAATCTCACTCTCATCGCCAAGAATCCAAACAACCACCTCGTCTTCTTCTACGATCCGTTCACCATCACCGCCATCTCTGATTCCGTCACGATCGGAAACGGTTCCCTGACGGCGTTCACCTCTGACAAGAACAACCAGACGAGTCTTCGAGCGGTGCTTTCTGGTTCACAAGATCTGGACACGGACTCGTTGAGTAGCCTGAGATCGGGGCTGAAGAGTAAGAAAGGGTTCCCGGTGGTGATTCAGATGGATACTAAGGTGAAGATGAGGATGGAGTGGTTGAAGAGCAAGAAGGTAGGGATTAGAGTGACGTGTGAAGGAATCAGAGGAACGGTTCCCGCCGGTAAGTCGCCGTCGGTGGCTTCCGTCATTAACTCGGAATGTAAGGTGGATCTCCGAATCAAGATCTGGAAATTCTCATTTTAA 771 0.5175 MTEPSSKPNGAINGAAATNGNPGPIKSQLYNPNRQVYRPQQYHRRQRSHRNLCCCCCFWTILTLLAAALLAAIVGAALYVLYRPHQPQFSITNLRIAKMNLTTSNDSPSHLTTLFNLTLIAKNPNNHLVFFYDPFTITAISDSVTIGNGSLTAFTSDKNNQTSLRAVLSGSQDLDTDSLSSLRSGLKSKKGFPVVIQMDTKVKMRMEWLKSKKVGIRVTCEGIRGTVPAGKSPSVASVINSECKVDLRIKIWKFSF. 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01248 256 Pfam Late embryogenesis abundant protein 121 220 IPR004864 -
Seca4g01248 256 MobiDBLite consensus disorder prediction 1 30 - -
Seca4g01248 256 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 16 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01248 Seca-Chr4 19725467 19726237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01248 32 249 EF-hand Containing Proteins AT5G21130 26.754 3.64e-18 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01248 - - gmx:100775320 414.846