Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01241 ATGCAAAGCCTAACTCCACGCACCTTCTCAAACGACGTCGTCCACCTAGACCTCACTAGTACTAGTACTACTACTACCTCCTCCTTATCCATGGACCTCGACGAATCCACCGAGACCCGAATCCAACGCCTCATATCAGAACACCCTGTCATCATCTTCACCCGATCTTCCTGCTGCATGTGCCACGTCATGAAGAATCTCCTCTCCACCATCGGTGTCCATCCCACCGTCATCGAATTGGACGATCAAGAGATCACCGCCCTCCCTCCCTCCGCTCCAGCCGCCTTCATCGGCGGCACCTGCATCGGAGGCTTAGAATCCCTCGTCGCCCTCCACGTCACCGGCCTCCTCATCCCCAAGCTCGTTGAAGTCGGTGCTCTCTGGGTACATGAATGA 396 0.5581 MQSLTPRTFSNDVVHLDLTSTSTTTTSSLSMDLDESTETRIQRLISEHPVIIFTRSSCCMCHVMKNLLSTIGVHPTVIELDDQEITALPPSAPAAFIGGTCIGGLESLVALHVTGLLIPKLVEVGALWVHE. 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01241 131 CDD GRX_GRXh_1_2_like 49 120 - -
Seca4g01241 131 PANTHER GLUTAREDOXIN 40 128 IPR011905 -
Seca4g01241 131 Pfam Glutaredoxin 50 100 IPR002109 -
Seca4g01241 131 ProSiteProfiles Glutaredoxin domain profile. 38 128 - -
Seca4g01241 131 NCBIfam glutaredoxin-like family 41 129 IPR011905 -
Seca4g01241 131 Gene3D Glutaredoxin 31 130 - -
Seca4g01241 131 SUPERFAMILY Thioredoxin-like 38 128 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01241 Seca-Chr4 19638702 19639130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01241 40 129 Miscellaneous Gene Families AT4G15660 42.000 1.63e-23 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01241 - K03676 gmx:100780137 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01241 4 19638702 19639130 Seca4g01241 4 19638702 19639130 PCT