Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01227 ATGTGGGAATCAATTGTTTTGACGGTAGCTGCGACTGCCGGCAACAACATCGGCAAGATCCTTCAAAAGAAAGGCACAGTTATTCTTCCCCCTCTCTCTTTCAAGCTCAAGGTCATAAGGGCGTATGCTTTAAACAAACCATGGGTGATAGGTTTTCTAATGGATATCTTTGGGGCATTATTGATGTTAAGGGCTTTAGCTCTGGCTCCTGTCTCTGTCATCCAACCAGTTTCTGGCTGTGGACTGGCAATTCTTTCAATCTTCTCTCATTTTTATCTCAAGGAAGTCATGAATGCTGTTGATTGGGTGGGCATTACCTTGGCAGGTTTTGGCACAATAGGAGTAGGAGCTGGCGGCGAGGAGCAAGAGGCTGCTGCTCTATCTGTTTTTCACATACCATGGCTGGCATTTGTGGTTTTCATCTTGTTTGTAGAGACACTTCTTCAGATCATGCTTAATGGATGGCTTCGTATATGTAAACATCAGCGAAGAGAGCAAGAGATGATGGAACATGATGTTGTTGAGGAAATAATTTACGGCTTGGAATCTGGAATTTTGTTCGGGATGGCATCTGTAATATCAAAGATGGGATTTCTATTCCTGGAACAAGGCTTCCCTAAGGTGTTGGTTCCAATGTGCATTATCACGAGTGTGTGCTCAAGTGGTACAGGTTTTTACTACCAGACACGCGGTCTAAAGCATGGGAGGGCTATTGTAGTTTCTACATGTGCAGCCGTGGCATCAATTTTGACTGGTGTACTTGCCGGGATGCTTGCTTTGGGAGAGCGACTCCCTTCAGCCCCAAGAGCTCGTTTGTCGCTTCTTCTTGGATGGGTACTTATTATTGTGGGTGTGATTTTGCTTGTTGGTTCAACAAGGCTAGTGAGATTCCTTCGATTTTCTTCACTACGCTTTAAAAGGAGCAATGTTGATAGGAATTATGGCCCTAGAAGATCTGGGACTTCCCGTACAAGGGAACCAAGTCCAACTGCTGTCATTCAAGCAGCGACCTTAAATCATCTGCTATCATCATCTTCCAAAGAAAAAGCTTGA 1053 0.4444 MWESIVLTVAATAGNNIGKILQKKGTVILPPLSFKLKVIRAYALNKPWVIGFLMDIFGALLMLRALALAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWVGITLAGFGTIGVGAGGEEQEAAALSVFHIPWLAFVVFILFVETLLQIMLNGWLRICKHQRREQEMMEHDVVEEIIYGLESGILFGMASVISKMGFLFLEQGFPKVLVPMCIITSVCSSGTGFYYQTRGLKHGRAIVVSTCAAVASILTGVLAGMLALGERLPSAPRARLSLLLGWVLIIVGVILLVGSTRLVRFLRFSSLRFKRSNVDRNYGPRRSGTSRTREPSPTAVIQAATLNHLLSSSSKEKA. 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01227 350 PANTHER UNCHARACTERIZED 2 307 IPR008521 GO:0015095|GO:0015693|GO:0016020
Seca4g01227 350 FunFam Probable magnesium transporter 5 119 - -
Seca4g01227 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 25 119 - -
Seca4g01227 350 Gene3D - 4 118 - -
Seca4g01227 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 191 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01227 Seca-Chr4 19484171 19489146 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01227 - - gmx:100803982 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01227 4 19484171 19489146 Seca4g01227 4 19484171 19489146 PCT