Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01212 ATGTTGAAACTGTACTGCGAGAGAGCAAACCTGAAAGATGGTCACACAGTTCTTGATGTCGGATGCGGTTGGGGATCACTGGCTATATACATTGCCAAGAAATACAGTAACTCCAGGGTTACAGGAATCTGCAATTCCACAACTCAAAAAGCTTATGTTGAGGAGAAGTGCCGGGACCTTCAACTGCAAAATTTGGATATCATTGTTGCAGATATTAGCACATTTGAAATGGAAGCTTCTTATGACAGAATATTTTCCATAGGAATGTTTGAGCATATGAAGAACTATAAAGATCTTCTCAAGAAGATATCCAAATGGATGAAAGAGGATAGCCTTTTATTTGTTGAGCTTTTCTGCCACAAAGTTTTTGCCTACCACTTTGAGGATGATGTTACTGTTGTTAACCATTGGCTAGTAAATGGAAAACACTACGCACAGACCAGTGAAGAATGGCTGAAAAGAATGGACCAGAGCATGGCTTCAATCAAGCCGATTATGGAATCAACGTATGGTAAGGATTCGGCTATCAAGTGGACTGTCTATTGGAGAACTTTCTTCATTGCTATAGCAGAACTTTTTGGATACAATAATGGCGAAGAATGGATGGTTGCACACTTTCTTTTCAGAAAGAAATAA 636 0.3915 MLKLYCERANLKDGHTVLDVGCGWGSLAIYIAKKYSNSRVTGICNSTTQKAYVEEKCRDLQLQNLDIIVADISTFEMEASYDRIFSIGMFEHMKNYKDLLKKISKWMKEDSLLFVELFCHKVFAYHFEDDVTVVNHWLVNGKHYAQTSEEWLKRMDQSMASIKPIMESTYGKDSAIKWTVYWRTFFIAIAELFGYNNGEEWMVAHFLFRKK. 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01212 211 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 210 IPR029063 -
Seca4g01212 211 CDD AdoMet_MTases 16 118 - -
Seca4g01212 211 PANTHER - 1 129 - -
Seca4g01212 211 Pfam Mycolic acid cyclopropane synthetase 3 116 - -
Seca4g01212 211 Gene3D Vaccinia Virus protein VP39 1 205 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01212 Seca-Chr4 19286654 19288558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01212 2 117 Acyl Lipid Metabolism Gene Families AT3G23510 29.412 1.13e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01212 - - gmx:100818389 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01212 4 19286654 19288558 Seca4g01212 4 19286654 19288558 ECH