Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01207 ATGAGGAGGAAGACGGATAGGAAGAAGAAGAAGAATGGTGCTGCCATTGCCAATGGCCAAGAAAATGAAGAAAAAGGGGTTAAGTTGAAGGGAGCTCAGAGGTCAGCGCACTTTGCTCGGAGAGAAGCAGCGAAGGTTTTGAGAGTGGTTCTCGAAGGAGACGCTAAACGCCGTGCACTCGCCTCTATCAAATCCCTCATATATCAACCCTCCGTCAGAAACAAGAAAGCCACCTTTGCTCTCATTTGTCAAACCCTCAAGCATCTTCCCATTATCAAGGATGTCTTGGAAGCTGCTTCTATTCTTAACACCAAGTGGAAGAGGCAACGAGAATTGATTTACATCATTGTCTATGATATCCTTTTCGGTCAGGCAGTTTCACTTGTTGGTGATGCAGAGAAGTACCTTATGCGCCACAAAGAGGCCTTGCAATCAACTCTGAAACAACTTATGTTGAAGAGAAATGTGAAGACCGTTAAACAGTTGATTGCTCTACACGAAGTTCCTGATGTTTCTGTGCCTCGCTATGTTCGTGTTAACACACTTAAAATGGATGTTGATTCTGCCTTACTTGAGCTGCGGGAAAAATACTCGGTTCAGAAGGATGATTTACTGCCTGACTTGCTGATACTCCCACCAGGAACTGATTTACATGATCATCCTCTTGTCAAGAATGGAAGTATCTTTTTGCAAGTAGGAATTACTCCTTATTTGTTTTAA 720 0.4319 MRRKTDRKKKKNGAAIANGQENEEKGVKLKGAQRSAHFARREAAKVLRVVLEGDAKRRALASIKSLIYQPSVRNKKATFALICQTLKHLPIIKDVLEAASILNTKWKRQRELIYIIVYDILFGQAVSLVGDAEKYLMRHKEALQSTLKQLMLKRNVKTVKQLIALHEVPDVSVPRYVRVNTLKMDVDSALLELREKYSVQKDDLLPDLLILPPGTDLHDHPLVKNGSIFLQVGITPYLF. 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01207 239 FunFam Putative 28S rRNA (Cytosine-C(5))-methyltransferase 166 230 - -
Seca4g01207 239 Gene3D Sun protein; domain 3 166 230 - -
Seca4g01207 239 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01207 Seca-Chr4 19218188 19219756 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01207 K15264 - gmx:100775620 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01207 4 19218188 19219756 Seca4g01207 4 19218188 19219756 ECH