Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01191 ATGCTCTCTGAACTAGCTCGCCTCTTGAACATCACCATCGTTGGTGGTTCTATACCTGAACGCTCTGGAGATCGGTTATACAACACTTGTTGTGTCTTTGGCACTGATGGAAAGCTAAAAGCCAAGCACCGCAAGATACATCTTTTTGATATTGACATCCCTGGGAAGATTACCTTTATTGAATCAAAAACTCTTACTGCTGGGGAGACTCCAACAATTGTGGACACAGAGGTTGGACGCATTGGCATAGGCATCTGTTATGACATTCGATTTCCGGAACTAGCAATGATATATGCAGCAAGAGGTGCTCACTTGCTCTGTTATCCTGGGGCATTTAACATGACAACTGGACCATTGCATTGGGAGTTATTGCAGAGGGCAAGGGCTACAGATAATCAGCTATATGTGGCAACCTGTTCACCTGCTCGGGATACTGGATCTGGTTATGTGGCTTGGGGTCACTCCACTCTTGTTGGACCATTTGGAGAAGTTCTGGCTACTACAGAACATGAGGAAGCCATCATCATAGCAGAAATTGATTATTCAATATTGGAGCAGAGAAGGACAAATCTCCCTGTGACTAAGCAACGACGAGGAGATCTTTACCAATTGGTGGATTTTCAGAGGCTGAATTCCCACTGA 642 0.4486 MLSELARLLNITIVGGSIPERSGDRLYNTCCVFGTDGKLKAKHRKIHLFDIDIPGKITFIESKTLTAGETPTIVDTEVGRIGIGICYDIRFPELAMIYAARGAHLLCYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPARDTGSGYVAWGHSTLVGPFGEVLATTEHEEAIIIAEIDYSILEQRRTNLPVTKQRRGDLYQLVDFQRLNSH. 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01191 213 SUPERFAMILY Carbon-nitrogen hydrolase 2 197 IPR036526 -
Seca4g01191 213 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 1 181 IPR003010 GO:0006807
Seca4g01191 213 Pfam Carbon-nitrogen hydrolase 2 184 IPR003010 GO:0006807
Seca4g01191 213 PANTHER NITRILASE-RELATED 1 205 - -
Seca4g01191 213 ProSitePatterns Uncharacterized protein family UPF0012 signature. 82 102 IPR001110 -
Seca4g01191 213 CDD nit 1 198 IPR045254 GO:0016811
Seca4g01191 213 Gene3D - 1 207 IPR036526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01191 Seca-Chr4 19116459 19122008 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01191 K13566 - gmx:100817195 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01191 4 19116459 19122008 Seca4g01191 4 19116459 19122008 ECH