Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01181 ATGGCTGTATCCTCTACCACCACCACAGTATGCATTCCTGGTAGTAACAACATTCCAACCACTCAACCACCAAAATTTGGATTCTTAACTACCACAATCCGTTTCACTGTGAAACCGCGGAGATTCTGCATCAGAAGCTCCAGTGATGTCTCTGCTGAGACCACTGAGACAGAGGTAGATTCAGAGAGTTCCATTGAAGTTCCAAAAGAACCGCCATCTCTGATTTCTGCTCTCAATGTGGAAAGGGCTCTCCGTGGCATACCAATTACGGACGCAGATCATTATGGAAGACTCGGCGTTCCAAGAGGATGTTCCTTTGAGATGGTGGCGGTTGCATATAATAACAAGGTTCGAGCATTGGAGAGTCAAGGTTTAGAGGAAGACGAACTCAAGAAGAAAACGGAACTTCTCAGAGAATCTTACACCATACTATCATCGGAACAAGAAAGAAGGATATATGATTGGAGCTTGGCCAGAACAGAGAATACAGGCAGATACGTTTGGCCGTTCGAGGTAGACATAACACAAACCCCAAGAGGAGATGCTCCACCACAGGAACCCGAGGATGAGGGACCAACAAGAGTGGTCGGATACGTCTTCCTGGGATGGATAATGCTCTCGATTGTGTTATCTATTTCACTGAACTTATAG 651 0.4578 MAVSSTTTTVCIPGSNNIPTTQPPKFGFLTTTIRFTVKPRRFCIRSSSDVSAETTETEVDSESSIEVPKEPPSLISALNVERALRGIPITDADHYGRLGVPRGCSFEMVAVAYNNKVRALESQGLEEDELKKKTELLRESYTILSSEQERRIYDWSLARTENTGRYVWPFEVDITQTPRGDAPPQEPEDEGPTRVVGYVFLGWIMLSIVLSISLNL. 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01181 216 SUPERFAMILY Chaperone J-domain 92 159 IPR036869 -
Seca4g01181 216 Gene3D DnaJ domain 88 166 IPR036869 -
Seca4g01181 216 FunFam NAD(P)H-quinone oxidoreductase subunit U chloroplastic 75 166 - -
Seca4g01181 216 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT U, CHLOROPLASTIC 1 215 IPR044199 GO:0009535|GO:0010598
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01181 Seca-Chr4 18888632 18890284 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01181 K23052 - gmx:100793741 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01181 4 18888632 18890284 Seca4g01181 4 18888632 18890284 ECH