Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01175 ATGGCTGTGAATGTGAGTGACTCCTCCACTGAGACAGAAACCAAGACGGTGTCGTATTCTTGGGGAAATGCTCAAACACCATTCGCACTTCCCTCTTTCTCTCTCAGACTACCCATCACCACTTTCGTTTCTCCACCCCAACTCCGCACATCCATCACCACTGCCACTGATAACTTTTTCAGATTTCTGGACTCCCTCGCTTATCAAAACCCCCTCCTCAAGAAACTTCTCTCTCTTCCCTCGGAATTCCAGAGCTTATGCTGCCAGATTCGGTGCAGTAACTACAAGAACACGAGATTGCTGAGTAGTCACAATTTTGCTGCCGTTTTACCTGGGGATTCGGTGGCAGGGCTAGTGGTGGCTAATGGAGTCCTGAATTTCTTGAACATTTACAACACCTTGCTCATTGTCAGGCTTGTTTTGACCTGGTTTCCCAACACTCCTCCTGCAGTTGTTAGTCCCCTCAGCACCATATGTGACCCATATCTGAACTTATTCCGTGGACTGATCCCCCCTCTTGGAGGAACACTGGATCTCTCTCCCATCCTAGCATTTCTGGTCCTAAATGCTTTCACTAGCACTGCTGCTGCACTCCCTGCTGAGCTTCCAGTCACAGAACAATCTAAACAAGGTCTTGCAGCAAGATTACAGGCTACTGATGTTACTTCTTCACAGAAGAAATGGATCAGACGGCTTCAAGGGAACAGGTCAAAGAGCTCGGGTCTTGCCAATTAG 735 0.4816 MAVNVSDSSTETETKTVSYSWGNAQTPFALPSFSLRLPITTFVSPPQLRTSITTATDNFFRFLDSLAYQNPLLKKLLSLPSEFQSLCCQIRCSNYKNTRLLSSHNFAAVLPGDSVAGLVVANGVLNFLNIYNTLLIVRLVLTWFPNTPPAVVSPLSTICDPYLNLFRGLIPPLGGTLDLSPILAFLVLNAFTSTAAALPAELPVTEQSKQGLAARLQATDVTSSQKKWIRRLQGNRSKSSGLAN. 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01175 244 PANTHER YLMG HOMOLOG PROTEIN 2, CHLOROPLASTIC 40 202 IPR003425 GO:0016020
Seca4g01175 244 Pfam YGGT family 127 190 IPR003425 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01175 Seca-Chr4 18822768 18824816 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01175 K02221 - gmx:100791676 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01175 4 18822768 18824816 Seca4g01175 4 18822768 18824816 ECH