Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01167 ATGCTTCCGTCGTTTGTGAGCATCGCGTCGCTATACAGCGGTTACCTCCGTCGCTGTTTCACAGGGGCAGGGCTCACCTCACAATCCATTGACGTGGACGATGAAACCACCGTCCATTTTTGGGGTCCGAAAAATCAAACGGCTGAGAAACCTTCCTTGGTTCTGATTCACGGGTTTGGTCCAATGGCAATTTGGCAATGGCGTCAACAGGTTCAATTTTTGGCACCACACTTCAACGTGTACGTTCCTGATCTAATCTTCTTCGGAGGGTCAACGAGCAGGTCAAATGAGAGAAGCGAGAGGTTTCAAGCAGCGTCGGTGGGGAAATTGCTGAACAAGTTAGAGGTGAAGAAGTTCCATGTGGTGGGAACGAGCTATGGTGGGTTTGTGGCTTATCATTTGGGAACTTTGTTGGGGGAAGAGAGGGTAGAGAAAGTGGTGATTGCTAGCTCTGGTGTTAACATGAGAATGAGTGATAACGTGGCGTTGTTGGAAAGGGCTCAATTGGACAAAATTGAAGACCTTATGTTGCCTGCTACGCCCCAACAATTGCGTAAATTGATGACATTGTCTGTATCTAAGCGTCTCCATATGTTGCCTGATTTTTTCTTGAAGGACTTCATTAATAAATTATATGCAGAAAATAGGAAGGAAAAGATGGAGCTTCTGAAAGGAATATCCCTCGGAAGGGATGACACTTTGAATATTTCACCTCTTCAACAGGAGGTTCTCATAGTCTGGGGGGAACATGACCGGATATTTCCTGTGCGGATGGCCCATGAACTGAAAGAGGTAATCAGTAAGAAGGCGAGATTGGAATTGATAAAGGACGCATCCCATGTGCCTCAAATTGAAAAGCCAGCAGAATTCAACAACATTATCCTAAATTTCTTGCATGCGAGTTCTTGA 909 0.4543 MLPSFVSIASLYSGYLRRCFTGAGLTSQSIDVDDETTVHFWGPKNQTAEKPSLVLIHGFGPMAIWQWRQQVQFLAPHFNVYVPDLIFFGGSTSRSNERSERFQAASVGKLLNKLEVKKFHVVGTSYGGFVAYHLGTLLGEERVEKVVIASSGVNMRMSDNVALLERAQLDKIEDLMLPATPQQLRKLMTLSVSKRLHMLPDFFLKDFINKLYAENRKEKMELLKGISLGRDDTLNISPLQQEVLIVWGEHDRIFPVRMAHELKEVISKKARLELIKDASHVPQIEKPAEFNNIILNFLHASS. 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01167 302 Pfam alpha/beta hydrolase fold 51 287 IPR000073 -
Seca4g01167 302 Gene3D alpha/beta hydrolase 16 301 IPR029058 -
Seca4g01167 302 PRINTS Alpha/beta hydrolase fold signature 121 134 IPR000073 -
Seca4g01167 302 PRINTS Alpha/beta hydrolase fold signature 77 92 IPR000073 -
Seca4g01167 302 PRINTS Alpha/beta hydrolase fold signature 243 257 IPR000073 -
Seca4g01167 302 PANTHER SI:DKEY-122A22.2 8 299 - -
Seca4g01167 302 SUPERFAMILY alpha/beta-Hydrolases 24 298 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01167 Seca-Chr4 18670188 18672697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01167 229 298 Acyl Lipid Metabolism Gene Families AT3G10840 41.892 1.34e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01167 - - lja:Lj1g3v1788330.1 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01167 4 18670188 18672697 Seca4g01167 4 18670188 18672697 ECH