Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01111 ATGCAACAGGTCAGGCACATGTTTGATGAAATTGATTATGTCCTAGAGGGAAAAAATGCTGAGCGTTTTGCTTCTCTCTACTGTTGGTCTGCAAGTGGAGGTAAAATCAAACAACAAAGAATGAAGTCCATTAAAGCTCCAAAAATATATTGGGACTATACATGCCCCACTGTACTGACTATGGAGTGGATAGATGGAATCAAGCTTACAGATGAAACAGGCTTGAATGAAGCTTCTTTGAACAGAAGGGAACTCATTGACCAGGGATTATACTGCTCTTTGAGGCAACTGCTTGAGGTTGGTTATTTCCATGCCGATCCTCATCCAGGAAACCTTGTTGCCACAAATGATGGATCACTTGCATATTTTGACTTCGGAATGATGGGGGATATTCCTAGGCATTACCGTATTGGACTTATTCAAGTGATTGTGCATTTTGTTAACCGTGATTCTCTTAGCTTGGCAAATGATTTCCTTTCTTTGGGGTTTATTCCTGAAGGGATTGATATACATTCAGTTTCTGATGCACTGCGAGCATCATTTTCTGATCGGACCACTGAATCTCAAGATTTCCAGGCAATAATGAACCAACTATATGATGTCATGTATGAATTTAACTTCTCCCTCCCACCAGACTATGCTCTTGTTATAAGAGCATTGGGATCATTAGAAGGGACAGCTAAAGTTCTGGATCCTGATTTTAAAGTCATTGAGAGTGCATATCCTTTTGTCATTGGGAGACTTATAGCAGACCCAAGTGCCGATATGAGAAGAATTTTAAGGGAACTTGTTATTCGTAATGATGGATCCATAAGGTGGAACCGGCTAGAGCGACTGGTAGCAGCAATATCTGAACAGGCTTCTGAGCTAACTGGAGACCCTAGTCCTGAAACATTTTCAAGTCCTTCTGTTTGGAAATTATTTGACATGCATGCTGTTGTTGATTCCACTGAAGATCTTCTATTATTCATATTATCAGAGAAGGGTCACAGAGTGCGTCTTTTCCTTCTTCGGGATATAGTAGAAGCAGCTGATGTGTTTCTTCAAGATGAAGTGATTGATTACATGTTAAATGAGAAGCCTCAAGGCCAGAGGATACCGCTCTTTGAGGTATTGGCTTTTGTTTAA 1128 0.4043 MQQVRHMFDEIDYVLEGKNAERFASLYCWSASGGKIKQQRMKSIKAPKIYWDYTCPTVLTMEWIDGIKLTDETGLNEASLNRRELIDQGLYCSLRQLLEVGYFHADPHPGNLVATNDGSLAYFDFGMMGDIPRHYRIGLIQVIVHFVNRDSLSLANDFLSLGFIPEGIDIHSVSDALRASFSDRTTESQDFQAIMNQLYDVMYEFNFSLPPDYALVIRALGSLEGTAKVLDPDFKVIESAYPFVIGRLIADPSADMRRILRELVIRNDGSIRWNRLERLVAAISEQASELTGDPSPETFSSPSVWKLFDMHAVVDSTEDLLLFILSEKGHRVRLFLLRDIVEAADVFLQDEVIDYMLNEKPQGQRIPLFEVLAFV. 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01111 375 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 4 352 - -
Seca4g01111 375 Pfam ABC1 atypical kinase-like domain 5 155 IPR004147 -
Seca4g01111 375 CDD ABC1_ADCK3-like 5 158 - -
Seca4g01111 375 SUPERFAMILY Protein kinase-like (PK-like) 39 136 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01111 Seca-Chr4 17754933 17760829 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01111 K08869 - gmx:100811652 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01111 4 17754933 17760829 Seca4g01111 4 17754933 17760829 ECH