Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01104 ATGGCTGGGTCTGTATCTTGTAGTAATGGGTCCGCGCTGATTCCTAAAGCAATGCACAGTAAAAGTTTCTTTTTATCACCGATTCGTATTGCAGTGACAGTGGGTCGTAATGGCAACAACAGAATTTCTCGCTTACGCGTCTGTGTTTCTATGGTAGACTCCTCCTCCGATTTCGTTAAGCGCATGGAACAAGCCTGGTTAATCTCTCAGCAACCAAGGCCAATTGTATGTTCATCTTGCAACTCAAAAGGGCATATTGAATGCAAATGGTGTGGGGGTACTGGCTTTTTTATTATTGGTGACAACATGCTTTGTGAAGTCCCATCTAGAAACACTACCTGTATCATTTGCACTGGAAAGGGATCAACGTGCTGCTCTGGTTGTCAAGGAACAGGCTTTCGTGCAAAGTGGTTGGAAGAACCTCCTACATCCCAGTAG 438 0.4475 MAGSVSCSNGSALIPKAMHSKSFFLSPIRIAVTVGRNGNNRISRLRVCVSMVDSSSDFVKRMEQAWLISQQPRPIVCSSCNSKGHIECKWCGGTGFFIIGDNMLCEVPSRNTTCIICTGKGSTCCSGCQGTGFRAKWLEEPPTSQ. 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01104 145 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 57 133 - -
Seca4g01104 145 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 75 134 IPR036410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01104 Seca-Chr4 17664969 17667357 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01104 - - lja:Lj0g3v0271799.1 228.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01104 4 17664969 17667357 Seca4g01104 4 17664969 17667357 ECH