Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01101 ATGGAGATGACAGCCCAGCAACTGAGCCAATACAACGGCACGGACCCATCGAAGCCCATCTACGTGGCGGTGAAGGGCCGCGTCTTCGATGTCACCACCGGCAAATCCTTCTACGGTCCCGGTGGGCCCTACGCGATGTTCGCAGGCAAAGACGCGAGCAGAGCCCTGGCGAAGATGAGCAAGAACGAGGAAGATATCACCTCCAACCTCGATGGCCTCTCTGACAAAGAGATCGGAGTTCTCAATGATTGGGAGAACAAGTTCGTAGCTAAGTACCCTGTTGTTGCCACCCTTGTTAATTAA 303 0.5446 MEMTAQQLSQYNGTDPSKPIYVAVKGRVFDVTTGKSFYGPGGPYAMFAGKDASRALAKMSKNEEDITSNLDGLSDKEIGVLNDWENKFVAKYPVVATLVN. 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01101 100 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 2 99 IPR036400 -
Seca4g01101 100 FunFam membrane-associated progesterone receptor component 1 1 100 - -
Seca4g01101 100 Pfam Cytochrome b5-like Heme/Steroid binding domain 4 86 IPR001199 -
Seca4g01101 100 Gene3D - 1 100 IPR036400 -
Seca4g01101 100 SMART Cyt_b5_2 3 99 IPR001199 -
Seca4g01101 100 PANTHER MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED 2 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01101 Seca-Chr4 17648040 17648342 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01101 K17278 - gmx:100779765 187.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01101 4 17648040 17648342 Seca4g01101 4 17648040 17648342 ECH