Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01083 ATGAATGATGATCAAATCCACTGGTTCTCAATTGTTAACTCATTAATGATTGTTCTTTTCCTTTCGGGCATGGTAGCAATGATAATGCTGCGGACACTGTACCGTGACATTGCTAAGTACAATGAGCTTGAGACCCAGGAAGAAGCCCAAGAAGAGACTGGTTGGAAGCTTGTCCATGGTGATGTATTTAGGCCCCCTAACAACTCAGATTTGCTGTGTGTTTATGTTGGAACTGGGGTTCAGTTTTTTGGGATGATACTAGTAACCATGACATTTGCCATCCTTGGATTCCTTTCTCCTTCAAACCGAGGTGGTCTAATGACAGCTATGCTCTTGCTTTGGGTTTTCATGGGAATTTTTGCTGGTTACTCCTCAACTCGCTTGTACAAAATGTTCAAAGGATCAGAGTGGAAAAAACTTGCCCTCAGGACTGCAACCATGTTCCCTGCAGTTGTCTCTGTGATTTTCTTTATATTAAATGGTCTCATATGGGGGCAAAAATCATCTGGAGCTGTGCCATTTGGTACAATGTTTGCTCTAATCTTTTTATGGTTTGGGATCTCGGTTCCACTTGTTTTTGTGGGTAGTTATGTTGGATTCAAGAAGCCTGCAATTGAGACTCCTGTGAAGACAAACAAAATCCCAAGGCAGATCCCTGAGCAGGCCTGGTACATGAACCCTGCATTCTCAGTTCTGATTGGGGGAATACTCCCATTTGGAGCTGTTTTCATTGAGCTTTTCTTCATCCTCACCTCTATCTGGTTGAATCAGTTTTACTACATATTTGGGTTCCTCTTTTTGGTCTTCATAATCCTCATTGTCACTTGTGCTGAAATAACCATTGTGCTGTGCTACTTCCAGTTGTGCAGTGAGGATTACTTATGGTGGTGGCGGTCATACCTTACCTCTGGTTCTTCTGCTCTATACCTCTTCCTTTATGCAACATTCTACTTCTTCACCAAGCTTGAAATCACAAAGTTGGTATCTGCCATATTTTACTTTGGGTACATGCTTATAGCTTCATATGCATTTTTTGTGGTAACCGGCACTATCGGATTTTATGCATGCTTTTGGTTCACGAGGCTCATCTACTCCTCAGTCAAAATTGATTAG 1113 0.4187 MNDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDIAKYNELETQEEAQEETGWKLVHGDVFRPPNNSDLLCVYVGTGVQFFGMILVTMTFAILGFLSPSNRGGLMTAMLLLWVFMGIFAGYSSTRLYKMFKGSEWKKLALRTATMFPAVVSVIFFILNGLIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGSYVGFKKPAIETPVKTNKIPRQIPEQAWYMNPAFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFIILIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSAIFYFGYMLIASYAFFVVTGTIGFYACFWFTRLIYSSVKID. 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01083 370 Pfam Endomembrane protein 70 2 326 IPR004240 GO:0016020
Seca4g01083 370 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 3 370 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01083 Seca-Chr4 17477451 17481936 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01083 1 370 Miscellaneous Gene Families AT5G25100 89.459 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01083 K17086 - gmx:100780976 710.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01083 4 17477451 17481936 Seca4g01083 4 17477451 17481936 ECH