Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01069 ATGGCGTCTACCGATAAAGAACTGGAAGAGCAGCTTCTCAAAGCTGGTAACGAGCTCGTAGATCCTCCGTCGTCGGTGGAGGAGCTTCTCTCACTTTTAGATCGAGTTGAGAGTTGCTTATCAAAGGTTGAACAGTCACCTTCCAACTCTTTGCAAATTGCACTCACTCCATCATTGAAAGCATTAATTGGGGATAAACTTTTAAGGCATTCAGATGCTGATGTAAAAGTTGCAGTTGCCTCTTGCATCAGTGAAATAACAAGAATCACAGCTCCTGATGCTCCTTATGATGATGATCAAATGAAGGCTGTTTTTCAGTTAATTGTATCTTCATTTGAAAATCTACATGATAAATCAAGCAGATCATATAAAAAGAGGACCTCAATTCTTGAAACTGTTGCAAAAGTCAGATCATGTGTGGTAATGCTGGACCTTGAATGTGATGCCCTGATTTTGGAGATGTTTCAGCATTTCTTGAAGGCAAAAAGGGAACAACATCCAGAGGATGTTTTTTCATCCATGGAAACAATTATGACCCTTGTTCTAGAGGAAAGTGAAGATGTATCCCTGGATTTACTTTCTCCACTCCTGGCCAGTGTTAAGAAAGACAATGAGGAAGATTTTCCCATTGCTAAAAAATTGGGGGAGAGGGTTCTTGAAAATTGTGCAACCAAGCTTAAACCATACCTAGTGCAAGCAGTGAAGACATTGGGTATATCTGTGGATGATTATAGTAAGGTACTTGCTTCAATATGCCAAGATACATCTGAACCTGATAGCTTGGAGAAAAATGATGCATGTGTTACTACTGAGCATTTGGAAGATAAGGGCAAGTCAGCAAAACAATCACTGGAGGAGCCAACACAAGCGGTTAAAGAGGATGCAAAGGAAGCTTCACATTCTCAACAAGATAATCCTGATAGAGACAGATCTCCGAAGTCAGTCATGAGCAATGGTGTTGCATGTGTTGGAGAAGATAATGCTTTAGCAGATTCCAAGTCCATTAAAAAGCAAGAGGATGCTGATTGTTCTGGTCACTCCAAAGATTTGGAGATGTCTGTTCATGAGGAACTTAATGATTTGGATGCTGAAAAAACAGAACAAACCAAACAAAAGCCAGAACAAACCACCAAGAGACGAGGGAGGAAATCAAGCTCTTCAATGAAATTGGCAAAATCTTCTGAAGGCCAAGTTGTTGCTAATGAAAAGGACGCTGAGAAAATGCTGGAATCTGAAAGTCACAGCAAGGAAGCTCCCAGTTCCCCTCACAAGGACCATGCTATTGAAGAAGCAGGACCTTCAGAGAATGACAAAGAGGTTTATGATAAGATTTCATCACCAAAAGCATGCAATGATGAATCTGAAGCTATTGTTTCTCCTTCACCAAGTGAGACCTTCCATGATGAAAATCATTCAAAAAAACTTGAAAAAATGAAAGATAGTTCTGCTAAAGAAGGTGCTGCAGAGCGTGTTTCAAAGGTCTCTGAAGGAGCAAGTAATTCAGATGCTAAATCTGCCAGGCGGTCAGTGAAAAAGGCGCTTGGTCAAAACTCTGATGTGAAAAAAACTACTGCAGCAGATTCAGTCAAAAAAGGAAGTGGCACTGAAAGTGATGCTGGTGCTAAAAAGCACTCATCCAAGAAATTAGATGAAAACAAGAGTGGCAGTGGATCCTCTTCAAGGCACCTGGAGGACAAGAAAAAGTCGGGGCGGGGGAAAGCTAACTCTGAAACAGGTGTAGCAAAATCTTCTGCTACAGATGTGGATAAGGAAATGGTATCTTCTCCGACTCCAAGGTCTGATACAAAATCTACTAAAGATGAAAATTCAGAGGAGACCCCCAAGACAAATGCAAAGAGAAAATGTACTTCAGGAAAAGAAAATGAGTCTGATACCAAGGAACATGGTGAAAACCTTGTTGGTCTCCGGGTTGAAGTTTGGTGGCCTAAGGATCGTGAGTTTTACAAAGGTGTCATTGATTCTTTTGATTCCGCCAAAAAGAAGCACAAGGTAGTGTATGATGACGGTGATGAAGAAATATTAAATCTTCGGAAGGAAAAATGGAAGCCCATTAAAGCTGACTCAAATGCAGATGAGGATGAAGAAAGTGATCATGCAAGTCTTGACGCTTCGACTGATATGTATGTGCTGCATGCTAATGTCATTTATTGTCTACGCATCATTTATGTGGATTGTTCTATGATCCTATTCAGGTCCCCAAAGAAGAAAGGGAAAACAAGTGGCAGTGAATCAACTAAGCAACGAAAGATGGGTGCTTCTTCCAGAAGTGGTGGAGCAACAGGGTCAAGTAGATCAAAGGGCATACCCATGAAGTCTGGCCAAAAGTCCAAAGATGGCAAGAAATCCAAAGATTCCAAGACTATTAGCACATCTGAGGATGAAGTTGGTAGAAAAAAATCCAAGGACAGCACTCCTAAAAGTGGCAGCAGTAAATCTGCTGCTTCTGTGCAGAAAATGACTGGCAAATCCAAGAACACTGATACTTCCAAGACAAGCAAATCAAAGGATGATGACATTAGCACCCCAAAACCCTCTGCCAAGCCTAAGCATGAAATCCCAAAGAGTGGAAAATCCAAGAAAAAAACTCCCAAGACTGCTGCTTCCAAAGAAAAGCCCCACAAAAGTGAGGGAAAGTCTAAGGTCAATAGTGGCAAGATGAAAACTGGTTTATCGAAGAGAAAATATTCGGAGAATGAGAACTCGGATGTTTCAGCAAGAGAGGCAGAAGATACAAGGGGCAAGACGTCAAGTTCATCTAAGTCTAAGGTCAATAGTGGCAAGGTGAAAACTGGTTTACTGAAGAGAAAAGATTCGGAGAATGAGAACTCGGATGTTTCAGCAGGAGAGGCAGAAGATACGAGGGGCAAGACGTCAAGTTCATCTAAGTCTAAGGTCAATAGTGGCAAGGTGAAAACTGGTTTACTGAAGAGAAAAGATTCCGAGAATGAGAACTCGGATGTTTCAGCAGGAGAGGCAGAAGATACGAGGGGCAAGACGTCAAGTTCATCTAAGTCTAAGGTCAATAGTGGCAAGGTGAAAACTGGTTTACTGAAGAGAAAAGATTCGGAGAATGAGAACTCGGATGTTTCAGCAAGAGAGGCAGAAGATACGAGGGGCAAGACGTCAAGTTCATCTAAGGCACAAGGAAATGAGGCCAAGAGTGGAAAGAAGCGTCAGAGAAGCTAG 3207 0.4166 MASTDKELEEQLLKAGNELVDPPSSVEELLSLLDRVESCLSKVEQSPSNSLQIALTPSLKALIGDKLLRHSDADVKVAVASCISEITRITAPDAPYDDDQMKAVFQLIVSSFENLHDKSSRSYKKRTSILETVAKVRSCVVMLDLECDALILEMFQHFLKAKREQHPEDVFSSMETIMTLVLEESEDVSLDLLSPLLASVKKDNEEDFPIAKKLGERVLENCATKLKPYLVQAVKTLGISVDDYSKVLASICQDTSEPDSLEKNDACVTTEHLEDKGKSAKQSLEEPTQAVKEDAKEASHSQQDNPDRDRSPKSVMSNGVACVGEDNALADSKSIKKQEDADCSGHSKDLEMSVHEELNDLDAEKTEQTKQKPEQTTKRRGRKSSSSMKLAKSSEGQVVANEKDAEKMLESESHSKEAPSSPHKDHAIEEAGPSENDKEVYDKISSPKACNDESEAIVSPSPSETFHDENHSKKLEKMKDSSAKEGAAERVSKVSEGASNSDAKSARRSVKKALGQNSDVKKTTAADSVKKGSGTESDAGAKKHSSKKLDENKSGSGSSSRHLEDKKKSGRGKANSETGVAKSSATDVDKEMVSSPTPRSDTKSTKDENSEETPKTNAKRKCTSGKENESDTKEHGENLVGLRVEVWWPKDREFYKGVIDSFDSAKKKHKVVYDDGDEEILNLRKEKWKPIKADSNADEDEESDHASLDASTDMYVLHANVIYCLRIIYVDCSMILFRSPKKKGKTSGSESTKQRKMGASSRSGGATGSSRSKGIPMKSGQKSKDGKKSKDSKTISTSEDEVGRKKSKDSTPKSGSSKSAASVQKMTGKSKNTDTSKTSKSKDDDISTPKPSAKPKHEIPKSGKSKKKTPKTAASKEKPHKSEGKSKVNSGKMKTGLSKRKYSENENSDVSAREAEDTRGKTSSSSKSKVNSGKVKTGLLKRKDSENENSDVSAGEAEDTRGKTSSSSKSKVNSGKVKTGLLKRKDSENENSDVSAGEAEDTRGKTSSSSKSKVNSGKVKTGLLKRKDSENENSDVSAREAEDTRGKTSSSSKAQGNEAKSGKKRQRS. 1069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01069 1068 MobiDBLite consensus disorder prediction 778 812 - -
Seca4g01069 1068 CDD Tudor_Agenet_AtEML-like 640 689 - -
Seca4g01069 1068 MobiDBLite consensus disorder prediction 273 311 - -
Seca4g01069 1068 MobiDBLite consensus disorder prediction 399 449 - -
Seca4g01069 1068 MobiDBLite consensus disorder prediction 576 600 - -
Seca4g01069 1068 MobiDBLite consensus disorder prediction 601 638 - -
Seca4g01069 1068 FunFam Binding protein 635 687 - -
Seca4g01069 1068 MobiDBLite consensus disorder prediction 466 491 - -
Seca4g01069 1068 MobiDBLite consensus disorder prediction 897 923 - -
Seca4g01069 1068 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 289 840 IPR039776 GO:0007064
Seca4g01069 1068 SUPERFAMILY Tudor/PWWP/MBT 638 680 - -
Seca4g01069 1068 SUPERFAMILY ARM repeat 49 264 IPR016024 -
Seca4g01069 1068 MobiDBLite consensus disorder prediction 937 965 - -
Seca4g01069 1068 MobiDBLite consensus disorder prediction 813 834 - -
Seca4g01069 1068 MobiDBLite consensus disorder prediction 273 318 - -
Seca4g01069 1068 MobiDBLite consensus disorder prediction 331 638 - -
Seca4g01069 1068 Gene3D - 628 687 - -
Seca4g01069 1068 MobiDBLite consensus disorder prediction 740 1068 - -
Seca4g01069 1068 MobiDBLite consensus disorder prediction 835 859 - -
Seca4g01069 1068 MobiDBLite consensus disorder prediction 1021 1047 - -
Seca4g01069 1068 MobiDBLite consensus disorder prediction 331 381 - -
Seca4g01069 1068 SMART TUDOR_7 636 694 IPR002999 -
Seca4g01069 1068 MobiDBLite consensus disorder prediction 536 573 - -
Seca4g01069 1068 MobiDBLite consensus disorder prediction 686 709 - -
Seca4g01069 1068 MobiDBLite consensus disorder prediction 516 531 - -
Seca4g01069 1068 MobiDBLite consensus disorder prediction 751 777 - -
Seca4g01069 1068 MobiDBLite consensus disorder prediction 979 1007 - -
Seca4g01069 1068 MobiDBLite consensus disorder prediction 870 888 - -
Seca4g01069 1068 Pfam Sister chromatid cohesion protein PDS5 protein 28 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01069 Seca-Chr4 17212887 17222125 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01069 - - gmx:100809147 1105.89