Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01051 ATGCTGTGTAAACTGGTAGCTGGGCCACGGAAGAAGAAGTCTGGCACCGTTCCTGTTTACCTAAACGTCTATGACCTCACTACTATGAATGGCTATGCCTATTGGCTTGGCCTTGGAGTCTATCATTCAGGGGTTCAAGTTCATGGTATTGAATATGGTTTTGGAGCACATGAACATGACACAACAGGAATTTTTGAAGTGCAACCGAGACACTGTCCTGGGTTCACTTTTAGAAAATCAATTCTAATTGGAACAACAGATCTGGGCCCGAGAGATGTTAGGGCATTCATGGAGAAACTAGCTCAAGAGTACTCTGGGAACACCTATCATCTCATCTCAAAAAATTGCAACCACTTTTGTGATGATGTTTGTGTCAAATTAACTGGAAAGTCAATTCCTCGATGGGTAAATCGACTTGCTAGACTTGGTGTCTTTTCTGCAACTGTGTTCTTCCCCCTGGCCTAA 465 0.4323 MLCKLVAGPRKKKSGTVPVYLNVYDLTTMNGYAYWLGLGVYHSGVQVHGIEYGFGAHEHDTTGIFEVQPRHCPGFTFRKSILIGTTDLGPRDVRAFMEKLAQEYSGNTYHLISKNCNHFCDDVCVKLTGKSIPRWVNRLARLGVFSATVFFPLA. 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01051 154 Pfam PPPDE putative peptidase domain 18 147 IPR008580 GO:0008233
Seca4g01051 154 PANTHER DESUMOYLATING ISOPEPTIDASE 16 145 IPR008580 GO:0008233
Seca4g01051 154 SMART DUF862_2a 17 154 IPR008580 GO:0008233
Seca4g01051 154 Gene3D PPPDE domains 12 150 IPR042266 -
Seca4g01051 154 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01051 Seca-Chr4 16932425 16935837 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01051 K22763 - gmx:100306675 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01051 4 16932425 16935837 Seca4g01051 4 16932425 16935837 PCT