Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01050 ATGTCATCACCCTTCCCTTCTTGCTTTCGCCCTTCCTCAACCACCGATGACCACCACCACTATTCTTCTCCTCCGCCGCCGCCACCACCGCCACTTTCCACCAACCCCAACCTCTCCACCTATCTCTACCACACCGACATAGGCTTGATTTCCTTGACATGGTCACGCTCCATTATGGGTCGCTCCCTTCATGTTCAACTCCATCACCATCCATTTGATTCCCCTCCTTTCCCTTCTTCTTCTTCTTCTTCTTCTTCTCTCTCTTCCTCTTCCTCCTTCCACCTACACATCAAGCCCTTCATTTTCTGGAAAAAACACGGAACCAAGAAACTCTCCTCTAACACCCACTTGTTCTGGAACCTCTCCAAAGCCAAATTCGGGTCAGGACCCGAACCTCTCTCCGGGTTCTACGTTGCTGTTGTTGTGGACAAAGAAATGACCCTTCTCGTTGGTGACTCTAGCAGAGACGCGTTCAGCAAAACCAAAGCCCACGAACCCAAAAACACTCAATTTCTTTTGCTCAAGAGGGAACATGTCTTCGCTAACAAAATCTACAACACGAGAGCGAGATTCGGTGGCAAAATGAGAGAGATTCAGATAGATTGGGGCTCCAGGGACCATTCAAAACTCTGTTTCAGCGTTGATGGCAAAAGGGTTTTGCAGATTAAGCGGTTGAAATGGAAATTCAGAGGCAATGAGAGAGTTGAAGTTGATGGGGTACCCATTCAGGTCTCATGGGATGTCTATAATTGGCTCTTTGAGAAAGATAACAGTGATGGGCACGCCATTTTCATGTTCAAATTTGAAGAAGAAGACAACGATGAGGAACAACAGCGAGGTAAAGATAGGAACTCGGTGAATTTGTGGACTCAGCAGAATTGGAATTTGGGGGTTTATGAATGGGGGAAAATGGGTAAGAGTTGGTCTTCTTCGTCAGTGTCAATGGCATCTTCAGGAGGGTCTTTTGGTGGAAGCTCCTCTGTTTTGGAATGGTCCAGTGTAGAAGAGAATGAGTTGGTAGTTCCCACTGGGTTTTCTCTGCTTGTTTATGCTTGGAAACGCTGA 1065 0.4695 MSSPFPSCFRPSSTTDDHHHYSSPPPPPPPPLSTNPNLSTYLYHTDIGLISLTWSRSIMGRSLHVQLHHHPFDSPPFPSSSSSSSSLSSSSSFHLHIKPFIFWKKHGTKKLSSNTHLFWNLSKAKFGSGPEPLSGFYVAVVVDKEMTLLVGDSSRDAFSKTKAHEPKNTQFLLLKREHVFANKIYNTRARFGGKMREIQIDWGSRDHSKLCFSVDGKRVLQIKRLKWKFRGNERVEVDGVPIQVSWDVYNWLFEKDNSDGHAIFMFKFEEEDNDEEQQRGKDRNSVNLWTQQNWNLGVYEWGKMGKSWSSSSVSMASSGGSFGGSSSVLEWSSVEENELVVPTGFSLLVYAWKR. 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01050 354 MobiDBLite consensus disorder prediction 21 35 - -
Seca4g01050 354 PANTHER EXPRESSED PROTEIN 5 353 IPR008586 -
Seca4g01050 354 MobiDBLite consensus disorder prediction 1 35 - -
Seca4g01050 354 Pfam Plant protein of unknown function (DUF868) 36 353 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01050 Seca-Chr4 16920658 16921722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01050 5 267 EF-hand Containing Proteins AT5G28150 38.828 1.51e-53 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01050 - - psat:127087751 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01050 4 16920658 16921722 Seca4g01050 4 16920658 16921722 ECH
Seca4g01050 4 16920658 16921722 Seca4g01050 4 16920658 16921722 PCT