Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01032 ATGTACAGGGTAGCAAACGCATCGGAATATCTAGTTATCACTGGTGTTGGAATCAAAGACATAAAGCTTGCAAAGAAAGCATGGGTTCTCCCTGGCCAATCATATACAGTCTTCGACGTCTCTCCCGTGAACTACACCTTCGAAGACCTTGTCCAAGGCATCATCGAGGGAGAGACACGTGTCCTTGCAGCCTCCATGACCATGGAAGAGATTTTCAAAGGCACTAAAGATTTTAAACAGGAAGTGTTCGAGAAGGTTCAGCTTGAGCTTAATCAGTTTGGGCTTTTGATTTACAATGCCAATGTTAAGCAACTAGTGGATGTGCCTGGTCATGAGTATTTCTCTTATTTGGGTCAAAAGACACAGATGGAAGCTGCGAATCAAGCCAAGGTGGATGTGGCTGAGGCTAAGATGAAGGGAGAGATTGGAGCCAAGTTGAGAGAAGGACAAACGCTTCAGAATGCTTCTAAAATTGATGCTGAGACTAAGATTATATCTACTCAGAGGCAAGGAGAGGGTAAGAAGGAGGAAATAAAGGTTAGGACTGAAGTGAAGGTGTTTGAGAATGAAAGAGAAGCAGAGGTGGCAGAGGCTAATTCTGAACTTGCTAAGAAAAAAGCTGTTTGGGAAAAGGCTGCACAGGTGGCGGAGGTGGAAGCTGCCAAGGCTGTGGCACTTAGGGAAGCAGAGTTGCAAAGAGAGGTTGAGAGGATGAATGCTTTGACAACAACTGAGAAACTTAGAGCTGAGTTTCTTAGCAAAGCAAGCGTTGAGTATGAAACCAAGGTACAAGAAGCCAACTGGGAGCTGTACCAGAAACAAAAAGCGGCGGAAGCAATTCTGTTTGAGAAGGAGAAAGAGGCAGAAGCACAGAAAGCATTAGCAGAAGCAGCATTTTTCACTCGGCAGCAAGCAGCAGAGGCAGAGCTATTTGCAAAGAAAAAGGAGGCAGAGGGGCTTGTGGCACTTGGCCAAGCACAAGGGGCATATTTAAGGACACTTCTTGATGCATTGGGTGGCAACTATGGGGCTCTAAGGGACTACTTGATGATAAATGGTGGCATGTTTCAACAGATTGCTAAGATTAATGCTGAGGCAATTCGTGGACTTGAGCCTAAGATTAGTATTTGGACTAATGGTGGTAATGGTGGAGAAATAACTGATGGTACTGGTGCCATGGGAATGAAGGAGGTTGCTGGAGTGTATAAGATGTTGCCACCTCTGTTTAAGACAGTCCACGAGCAAACAGGTATGCTGCCACCGGCATGGATGGGAACCTTGCCTGACAAAAGTTCTTAG 1299 0.455 MYRVANASEYLVITGVGIKDIKLAKKAWVLPGQSYTVFDVSPVNYTFEDLVQGIIEGETRVLAASMTMEEIFKGTKDFKQEVFEKVQLELNQFGLLIYNANVKQLVDVPGHEYFSYLGQKTQMEAANQAKVDVAEAKMKGEIGAKLREGQTLQNASKIDAETKIISTQRQGEGKKEEIKVRTEVKVFENEREAEVAEANSELAKKKAVWEKAAQVAEVEAAKAVALREAELQREVERMNALTTTEKLRAEFLSKASVEYETKVQEANWELYQKQKAAEAILFEKEKEAEAQKALAEAAFFTRQQAAEAELFAKKKEAEGLVALGQAQGAYLRTLLDALGGNYGALRDYLMINGGMFQQIAKINAEAIRGLEPKISIWTNGGNGGEITDGTGAMGMKEVAGVYKMLPPLFKTVHEQTGMLPPAWMGTLPDKSS. 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01032 432 SUPERFAMILY Band 7/SPFH domain 47 125 IPR036013 -
Seca4g01032 432 Gene3D Band 7 domain 40 108 IPR036013 -
Seca4g01032 432 PANTHER FLOTILLIN-RELATED 48 429 IPR027705 -
Seca4g01032 432 Pfam SPFH domain / Band 7 family 47 137 IPR001107 -
Seca4g01032 432 CDD SPFH_flotillin 48 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01032 Seca-Chr4 16514995 16518075 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01032 K07192 - gmx:547522 663.299