Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01027 ATGCAGCTGGCGAGGAGAGCAACCCATGCTGGTTCTTGGTACACTGACAATACTATACAACTTTCAGAACAACTCGAAGGATGCCTGAGATTAACTTGTCTCACCAAATCCCCCAATGTACGGGGAGTAATAGCACCACATGCAGGTTATTCCTATTCTGGACGAGCTGCTGCCTATGCCTTTGGAAACATTGATCCATCTAACATTACAAGGGTGTTCCTTCTTGGTCCTTTTCACCACTATCACACTCCACACTGTGTTCTTTCAACTGCAACAGTCTACAAGACCCCCATAAGGGACCTACTTCTTGATTTAGAAGTAATTGAGCAGCTTAAAGCTACGGGAAAATTTGAACTGTTGGATATTCACATTGATGAGGCTGAACATAGCCTGGAAATGCACTTGCCATATCTTGCCAAAGTATTTGAGGGGAAACAGGTTAAAATTGTACCCATTTATGTTGGTGCTCTTAGTGCTGAAAATGAAGCCATCTATGGGCAGATTCTTTCTAAATATGTGGATGATCCAAATAATTTTTTCTGTATCTCATCTGACTTCTGTCACTGGGGATATCGATTTAATTACATGCTCTATGACAAGAAATGTGGTCCTATATACAAATCTATTGAGGCCTTAGACAAGATGGGAATGTATATCATTGAAACAGGGGATCCATATGCATTCAGACAATATCTGTCTAAGTATGGCAATACAATCTGCGGACACCGTCCAATCAGTGTTTATCTCCATATGCTGAGGAACTGCTCAACAAAAATAAAGATAAAATTTCTTGGCTATGAGCAATCAAGTCAGTGCATAAGTGCAGGCGATAGTAGTGTGAGTTATGCATCTGCAGCAGCAAGGATTGATTGA 873 0.4089 MQLARRATHAGSWYTDNTIQLSEQLEGCLRLTCLTKSPNVRGVIAPHAGYSYSGRAAAYAFGNIDPSNITRVFLLGPFHHYHTPHCVLSTATVYKTPIRDLLLDLEVIEQLKATGKFELLDIHIDEAEHSLEMHLPYLAKVFEGKQVKIVPIYVGALSAENEAIYGQILSKYVDDPNNFFCISSDFCHWGYRFNYMLYDKKCGPIYKSIEALDKMGMYIIETGDPYAFRQYLSKYGNTICGHRPISVYLHMLRNCSTKIKIKFLGYEQSSQCISAGDSSVSYASAAARID. 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01027 290 CDD MEMO_like 6 277 IPR002737 -
Seca4g01027 290 Gene3D - 3 289 - -
Seca4g01027 290 NCBIfam AmmeMemoRadiSam system protein B 5 286 - -
Seca4g01027 290 Pfam Memo-like protein 7 285 IPR002737 -
Seca4g01027 290 Hamap MEMO1 family protein <locus_tag>. 3 288 IPR002737 -
Seca4g01027 290 PANTHER PROTEIN MEMO1 4 289 IPR002737 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01027 Seca-Chr4 16378251 16383336 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01027 K06990 - gmx:100815790 461.07