Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01023 ATGTTGCCTTATTGGGTCAGCAAATGGGGTGTGTCATGGGAGGATGAGAGACCCGCCGATGGGAAGCTAGGACAAGACTGGGAAGCCTTGCACGACCAAATTTTGGTAATTCCAAAGTATTTCCTAGCTATTGCCTTGTCTTCTATCTATAATTGCTCTGTTCATAGCATTGTTTGCTTTGTTACTGCAGTCCTTATTTGCCTCAAAGTTATGGTGCGTGGGATCGCAGGAGCGAAATTCATTGATTGCATCAATGGACATGCCTCAAGTCGGTGTCAGACGAACTCGAACCGCATTAGTTCTCCCGTTGCGTCCATTGCTCCTACACTGTCAAAAGGCTTCTATTCCTTCTTTTCTGGCTTCTTTCTTAGTTTTAACATTGTGTTCTTTTTCTTTCAATTGTTACCTAGGCTTGAGAGTGAAAGTAGGCTTTACTTTGACATCAAGTATTTTGAGGAAATGGTGCTTGCTGGGAAATGGGATGATATTGAATACTATCTTTCAAGGTTCACAAAGGTTGATGACAACATGCACTCACGAAAAATATTTTTTGATTTGAGGAAACAGAAATATTATGAGGCATTAGACAGTAATGATCGTGCCAAGGCTTTAGATATCCTCAAAAAGGATCTCAAGGTTTTTTCACAAGATGAGCAAGAGCTATTCAATGAATTGACACAGCTTTTGACAGTTAACAATTTAAGGGAAAATAAAACTCTTAAAATTCGTGGCGATGCAATTTCAGCTAGGAAGATTATTTGGGAAGAAATCAAGAAGGTCATTATGGAAAATCCTGTCTTCAAGGGAAATTTGGTATTTCCTACCATTGAAGATCATAGCTTGAATTGGATGCATCAATCTTGTGAAGACCATGACTGTAAACTTTTGTCAAACACTACTGTAACTGATTCTGCACCCATTCAAGATGAAGAGTCCTCTAACAGACCAATGCCTAGGAAACTCCCTGAAATTTTTTATCCATTGGAATGCAAGATCTCTACTCTACCGCTTCATCCCTTAGCAGACAAGTTTGGGAATGGCCTAACCCATCAGATTTTTGCTATATCAAAGCGCGATGAATTTGTAGTATCAACATATGGGGGGAATATCTCCATATTCAACATGTCTTCATTTCAGACTATGATGACTATCATCTATCCAACATTCATGGTGGTGCCAACCTGTGTTGCTTATTCTCCTTTGGATAATAATGTAATTGTTGTTGGTATGGATGATTCCAACATACTGGTATGCAATATTACTGCAATTGAGGTATATCTATCTCTTCTCTTCTCTTCTCTTCCTTCCTTCGTATTTCAAGGGGTTGAAGCTAAGCTAAGGTAG 1344 0.3914 MLPYWVSKWGVSWEDERPADGKLGQDWEALHDQILVIPKYFLAIALSSIYNCSVHSIVCFVTAVLICLKVMVRGIAGAKFIDCINGHASSRCQTNSNRISSPVASIAPTLSKGFYSFFSGFFLSFNIVFFFFQLLPRLESESRLYFDIKYFEEMVLAGKWDDIEYYLSRFTKVDDNMHSRKIFFDLRKQKYYEALDSNDRAKALDILKKDLKVFSQDEQELFNELTQLLTVNNLRENKTLKIRGDAISARKIIWEEIKKVIMENPVFKGNLVFPTIEDHSLNWMHQSCEDHDCKLLSNTTVTDSAPIQDEESSNRPMPRKLPEIFYPLECKISTLPLHPLADKFGNGLTHQIFAISKRDEFVVSTYGGNISIFNMSSFQTMMTIIYPTFMVVPTCVAYSPLDNNVIVVGMDDSNILVCNITAIEVYLSLLFSSLPSFVFQGVEAKLR. 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01023 447 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 352 426 IPR027728 GO:0006355
Seca4g01023 447 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 145 202 IPR006595 -
Seca4g01023 447 SUPERFAMILY WD40 repeat-like 358 422 IPR036322 GO:0005515
Seca4g01023 447 SMART ctlh 144 202 IPR006595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01023 Seca-Chr4 16328515 16332139 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01023 - - gmx:100777441 187.193