Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01020 ATGGATGTTGATGACCCTTCCAAGCACCGCGTCCTAACTCTCCTCAACGCTCTCAGAGAAACTTGCAAAGATCTTCACTCCAAAACCAACCCTTTCTCCTTTCTTCTCTTCAAAACCGATTCCATGGCCGCCATTGACGCTCTCTTAGAGCTCGAAGCAAAAGCTGTCGCTATTTTCTCAACTGACCCTAACCTTCGCAACCTCTTCCACTCACTCTCCACCCTCCGTACCTTGATCGAGAATCTCCACAAGTGCCGCGGCTATGGCCTCCGATCTCTCCTTCGCCGCCAAATCACCAATTACCAGATTTCCCAGCTCGCATGCTCCGTCGAGTCCCAAATTCAAGCCTACATCGACCGCGTAACCGTCCAAGACCTCGTGAAGACGCTCGTAGGACCCTGCGGTGAGGACGAGAAGCTTAAGGCTCTGGTCGATTTCGAAGAGAGGTTATCGCAGGGTTTCGATTTGGATTTTCAGGAATTGGTTTTGAGAGCGAAGGTTTTCAATGTTCTGGAACGAATGCTGTTTGAGCCGTTGAGTTCGAAAAGGGTTCAAGAAGAAGCAGCTGTGGCTATAGCGGCTTTGGTGAAGTTCAATAAGAATGTGTTTGTAGGGTTGGTTTTGATGGGTCCAACGATTAAGGCTTTGATAGCAATGGCTTCGAGTTGTTCTATACAGGTATTGTCGTCGCTTGTTAGATTCATTCGAAGCCCTTTGGTGGATGAGATTTTGTCCAGTGGAGAGATCCCTACAATTATTGGCTTTTTGTGGTCGCGAGATTTGTCCCTTCGTGTTGCTGCGTTGGATTGTGTTCTTGAAATTGCTTATATTGGGAGAAGGGAAGTTGTTGAGGCGATGCTTCAACAAGACTTGGTTAGGATTCTAATGGAGTTGCAAAGAGGGGATTGTGGAAGTGTGGGTTCGTATGACGTGGAGGAGGAGATCAGAGAAAAGGAAAATGGGGAGGGTTTTGATTTTGATTTTGATTTTGATTCTGATTCTCCTTTTGCTAGTTGTGTTTCGAGGTTTGCTATTCAATTGGAAGTAGGGGAAGGTTTGAGCCCTGAAGAGAAAAGAGAGGTGAAATTGGAGATATTGAGGATGGTGAAGGAGGCTTCCCAATCAGATGCAGAGTTTGCCACTGTTAGTGCTGAGGTACTGTGGGGTGCTGAGCCTTAA 1179 0.469 MDVDDPSKHRVLTLLNALRETCKDLHSKTNPFSFLLFKTDSMAAIDALLELEAKAVAIFSTDPNLRNLFHSLSTLRTLIENLHKCRGYGLRSLLRRQITNYQISQLACSVESQIQAYIDRVTVQDLVKTLVGPCGEDEKLKALVDFEERLSQGFDLDFQELVLRAKVFNVLERMLFEPLSSKRVQEEAAVAIAALVKFNKNVFVGLVLMGPTIKALIAMASSCSIQVLSSLVRFIRSPLVDEILSSGEIPTIIGFLWSRDLSLRVAALDCVLEIAYIGRREVVEAMLQQDLVRILMELQRGDCGSVGSYDVEEEIREKENGEGFDFDFDFDSDSPFASCVSRFAIQLEVGEGLSPEEKREVKLEILRMVKEASQSDAEFATVSAEVLWGAEP. 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01020 392 Gene3D - 91 306 IPR011989 -
Seca4g01020 392 SUPERFAMILY ARM repeat 122 302 IPR016024 -
Seca4g01020 392 PANTHER ARMADILLO-TYPE FOLD PROTEIN-RELATED 7 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01020 Seca-Chr4 16308161 16309339 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01020 - - vra:106761341 454.907