Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01008 ATGCAGAGACGAAGTCCTCCCAAACACAGGCACGATGGGACTTCGCCGCTGCCTCTCGGCATGGATTGGAGTCCTGCACCTCGAAAATGGAATGGGCGGGATACAGTATGGCCACATGATCATCGTACCGGTTGGAGTTATTGTGTCATAATACCTTCTTGGGTCTTCGTTCCAAAATCAAGGAATTCTGATCCTATAGTGGGACAGTTCTACAGGCTTCAAGTTGCTGTACAGTCACCAGAAGGGATTACAAGGATCCATGGAGTACTAAGAAGGTTCAATGATTTTCTGAAGTTGTTTGCCGATCTTAAAAAGGAGTTTCCCAGGAAAAATATCCCTCCAGCACCACCCAAGGGACTCTTGCGATTGAAAAGCCGGGCTTTGTTAGAAGAGGTTGGAAATGTCTTAACTTATTATGGTACCAGTTGTTGCATTTCTGACATTATGGATCTGCTTATGGCATCTTGCATGAATTTCCTTATTTTATAA 489 0.4438 MQRRSPPKHRHDGTSPLPLGMDWSPAPRKWNGRDTVWPHDHRTGWSYCVIIPSWVFVPKSRNSDPIVGQFYRLQVAVQSPEGITRIHGVLRRFNDFLKLFADLKKEFPRKNIPPAPPKGLLRLKSRALLEEVGNVLTYYGTSCCISDIMDLLMASCMNFLIL. 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01008 162 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 132 IPR044588 GO:0015031
Seca4g01008 162 Gene3D - 62 150 IPR036871 GO:0035091
Seca4g01008 162 Pfam PX domain 89 142 IPR001683 GO:0035091
Seca4g01008 162 ProSiteProfiles PX domain profile. 49 162 IPR001683 GO:0035091
Seca4g01008 162 MobiDBLite consensus disorder prediction 1 24 - -
Seca4g01008 162 SUPERFAMILY PX domain 40 139 IPR036871 GO:0035091
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01008 Seca-Chr4 16132020 16136167 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01008 - - gmx:100792151 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01008 4 16132020 16136167 Seca4g01008 4 16132020 16136167 ECH