Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00997 ATGTCTCTGAAAGCGTCGTATTCATCGGAAAATCTGATGCTTCCGGTATCGGATCCTCCGAACGACGAAGACCTAGAGAGGCTTTTGAAAGACAATGATAAGATCTTCAGAGGTTCCGCCATCACCAAACCAGGACGAGGGGTTTTCGCTGCTGTCTCTTACATGTCCTGCGCAGTGCTCTTGGTGATGTTCAATAAGGCCGCTCTTTCATCTTATAACTTCCCATCTGCAAATGTCATCACACTTCTTCAGATGGTATGTTCATGTTGTTTTCTCTATGTATTGAGGTGCTGGAGGGTAGTTTCTTTCACAGCAGGTGAAGCAGTAATTATAGCAGATAACTCGAAAAAATTTGTTCCATTGAAGACTTTGAAGCACACATTTCCTCTGGCAGGAGCATATTTACTTTATATGCTAGTCACCATGGAGTCTGTTCGTGGAGTAAATGTTCCAATGTATACCACCCTCAGGAGGACTACAGTAGTATTTACAATGCTTGTAGAGTATATGCTCGTTGGGCAGAGGTATACACCTCCTGTCATTTTCAGTGTTGGCTTGATTGTCTTTGGTGCATTTGTTGCGGGAGCAAGGGACCTTTCTTTTGATGCCTATGGTTATGCCATTGTTTTCCTGTCAAACATCACCACAGCTATATATCTTGCGACCATATCACGTGTTGGCAAAACTAGCGGGCTTAATAGCTTTGGTCTTATGTGGTGCAATGGTGTCATATGTGGGCCACTTTTGCTTATTTGGACATTAATACGTGGTGACTTGAAGATGACAATCAATTTCCCTCATCTGCTTTTACCGGGTTTTATTGTTGTTATGCTTTTTTCCTGCATCATCGCTTTCTTCCTGAATTACAGTATTTTTCTGAACACAACTCTTAATTCAGCTCTGACGCAGACAATTTGTGGTAATATGAAGGATCTATTTACTATTGGCTTTGGCTGGATAATTTTTGGCGGGCTACCATTTGATTTCTGGAATGTAATTGGGCAATTGCTCGGTTTTGCGGGCTCTGGTTTATATGCTTACTATAAGCTCATTGGCAAATAA 1062 0.4171 MSLKASYSSENLMLPVSDPPNDEDLERLLKDNDKIFRGSAITKPGRGVFAAVSYMSCAVLLVMFNKAALSSYNFPSANVITLLQMVCSCCFLYVLRCWRVVSFTAGEAVIIADNSKKFVPLKTLKHTFPLAGAYLLYMLVTMESVRGVNVPMYTTLRRTTVVFTMLVEYMLVGQRYTPPVIFSVGLIVFGAFVAGARDLSFDAYGYAIVFLSNITTAIYLATISRVGKTSGLNSFGLMWCNGVICGPLLLIWTLIRGDLKMTINFPHLLLPGFIVVMLFSCIIAFFLNYSIFLNTTLNSALTQTICGNMKDLFTIGFGWIIFGGLPFDFWNVIGQLLGFAGSGLYAYYKLIGK. 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00997 353 Pfam Triose-phosphate Transporter family 57 345 IPR004853 -
Seca4g00997 353 PANTHER SOLUTE CARRIER FAMILY 35 49 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00997 Seca-Chr4 16053789 16060459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00997 29 290 Organic Solute Cotransporters AT2G13650 25.455 1.09e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00997 K15281 - gmx:100778544 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00997 4 16053789 16060459 Seca4g00997 4 16053789 16060459 ECH
Seca4g00997 4 16053789 16060459 Seca4g00997 4 16053789 16060459 PCT