Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00993 ATGGCTCCGAGCACGATCCGGAAGGCGATTGGGGCGGTGAAGGACCAGACGAGTATAGGTATAGCGAAGGTGGCGAGCAATATGGCACCGGACCTTGAGGTGGCGATTGTGAAGGCTACGAGCCACGATGAGGATCCGGCGAGCGAGAAGTACATAAGAGAGATCTTGAACCTCATGTCCTATTCGCGTGGCTACATCCACGCTTGTGTGTCTGCGGTGTCGAAGCGTTTGGGAAAAACCAGGGACTGGATTGTGGCGTTGAAGGCTCTGATGCTGGTTCACAGGTTGATGAACGAGGGACCTCCTCTGTTCCAGGAAGAGATCATGTACGCCACCCGCAGGGGAACCAGGCTCCTTAATATGTCAGATTTCAGGGATGAAGCTCACTCCAGCTCTTGGGATCATTCCGCTTTTGTAAGGACCTATGCCATGTATCTTGATCAGCGCCTTGAGTTGATGTTATTTGAGAGAAAGAGTAGTGCTGCTGCTGCTGGTGGTGGCGGCGGTAGTGCTGGCGGTGCGGATGATAGGTTTGGTGGGAGAGACAATTTCAGGTCGCCGCCGTATGAATATGAGTATGGAGGAGGGGAATTTAGAGGGGAAGGTGGGTATGGGAATGGGATGAGAAGGACGAGATCGTTTGGTGATATGAGCGAATCTGTAGGGAGGGAAGACAGAAGGATTGTGCCTGTGACTGTGACTGTGACTCCGTTGAGGGATATGAAGCCGGAGAGGGTTTTTAACAAGATGGGTCATTTGCAGAGGTTGTTGGATCGTTTCTTGGCTTGTAGGCCTACTGGATTGGCCAAGAATAGCAGGATGGTTTTGATTGCACTGTATCCTGTGGTCAAAGAGAGCTTTCAGTTGTATGCAGATATATGTGAGGTTTTGGCTGTGTTGCTTGACAAATTCTTTGATATGGAGTACCCTGATTGTGTCAAGGCCTTTGATGCTTATGCCAGTGCAGCTAAGCAGATTGATGAGCTGGTTGCTTTTTACAATTGGTGCAAGGATACCGGTGTGGCGAGATCCTCAGAGTACCCAGAAGTTCAGAGGATTACTAGCAAGTTGCTTGAGACGTTGGAGGAATTTGTGAGGGATAGGGCCAAGAGGCCAAAGAGTCCAGAGAGGAAAGAGGAAGCTCCACCTGTGGAAAAACAAGAGGAGGAGCCGGTTCCAAATATGAATGAAATCAAGGCACTGCCTCCACCGGAGAATTATACCCCGCCTCCTCCGCCTGAGCCAGAGCCTAAGCCACAGCCACAATATACGGAGGACTTGGTGAATCTGAGAGATGATGCGGTCAGTGCAGATGACCAGGGTAATAGATTGGCTTTGGCACTCTTTGCTGGTGCACCAGGTAATAATGCAAATGGATCATGGGAAGCCTTTCCATCAAATGGACAACCAGAAGTGACTTCAGCTTGGCAAACCCCGGCCGCAGAACCAGGGAAAGCCGATTGGGAGTTGGCATTGGTAGAGACTGCTAGCAATTTATCAAGGCAGAAGGCCGATTTAGGTGGTGGGCTTGATCCATTATTGTTGAATGGCATGTACGATCAAGGAATGGTCAGGCAGCATGTCAGCACATCCCAACTGAGTGGAGGTAGTGCAAGCAGTGTGGCATTGCCAGGACCAGGAAAGACTACAACTCCTGTTTTAGCTCTACCAGCCCCAGATGGATCCGTGCAGCCAGTTAATCAGGATCCATTTGCTGCATCTTTAAGCATTCCACCCCCCTCCTATGTGCAAATGGCCGACATGGAGAAGAAGCAGCAGTTTCTTGTGCAGGAGCAGCAACTTTGGCATCAGTATGCAAGGGATGGGATGCAAGGCCAAACTAGCTTGGCCAAACTGGGTGGCTCTGGATACTATGCTGGAGGTCCTATGCCTTATGGAATGCCCCCTGTCAATGGAATGGGACCTCCAACCGGGTATTACCAAACTCCTTACTAA 1956 0.5046 MAPSTIRKAIGAVKDQTSIGIAKVASNMAPDLEVAIVKATSHDEDPASEKYIREILNLMSYSRGYIHACVSAVSKRLGKTRDWIVALKALMLVHRLMNEGPPLFQEEIMYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLELMLFERKSSAAAAGGGGGSAGGADDRFGGRDNFRSPPYEYEYGGGEFRGEGGYGNGMRRTRSFGDMSESVGREDRRIVPVTVTVTPLRDMKPERVFNKMGHLQRLLDRFLACRPTGLAKNSRMVLIALYPVVKESFQLYADICEVLAVLLDKFFDMEYPDCVKAFDAYASAAKQIDELVAFYNWCKDTGVARSSEYPEVQRITSKLLETLEEFVRDRAKRPKSPERKEEAPPVEKQEEEPVPNMNEIKALPPPENYTPPPPPEPEPKPQPQYTEDLVNLRDDAVSADDQGNRLALALFAGAPGNNANGSWEAFPSNGQPEVTSAWQTPAAEPGKADWELALVETASNLSRQKADLGGGLDPLLLNGMYDQGMVRQHVSTSQLSGGSASSVALPGPGKTTTPVLALPAPDGSVQPVNQDPFAASLSIPPPSYVQMADMEKKQQFLVQEQQLWHQYARDGMQGQTSLAKLGGSGYYAGGPMPYGMPPVNGMGPPTGYYQTPY. 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00993 651 Gene3D ANTH domain 233 378 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Seca4g00993 651 SMART enth_2 30 160 IPR013809 -
Seca4g00993 651 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 597 IPR045192 GO:0048268|GO:0072583
Seca4g00993 651 Gene3D - 2 155 IPR008942 -
Seca4g00993 651 MobiDBLite consensus disorder prediction 366 423 - -
Seca4g00993 651 Pfam ANTH domain 31 153 IPR011417 GO:0005543
Seca4g00993 651 Pfam ANTH domain 221 367 IPR011417 GO:0005543
Seca4g00993 651 SUPERFAMILY ENTH/VHS domain 30 151 IPR008942 -
Seca4g00993 651 MobiDBLite consensus disorder prediction 366 393 - -
Seca4g00993 651 SUPERFAMILY GAT-like domain 237 367 - -
Seca4g00993 651 FunFam Clathrin coat assembly protein 3 156 - -
Seca4g00993 651 FunFam putative clathrin assembly protein At2g25430 232 377 - -
Seca4g00993 651 CDD ANTH_N_AP180_plant 32 152 - -
Seca4g00993 651 ProSiteProfiles ENTH domain profile. 24 160 IPR013809 -
Seca4g00993 651 MobiDBLite consensus disorder prediction 403 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00993 Seca-Chr4 15988358 15991615 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00993 - - gmx:100803282 1050.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00993 4 15988358 15991615 Seca4g00993 4 15988358 15991615 ECH