Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00991 ATGCCGAGGCCAGGTCCGAGACCTTATGATTGCGTGAGAAGAGCTTGGCACAGTGAAAGACACCATCCCATCAGAGGAACTCTCATTCAAGAAATTTTCAGGGTTGTGGATGAGATACATGGCTCTGCTACTAAGAAAAATAAAGAGTATCAAGAGAAGCTCCCTGTTGTTGTTCTCAAGGCAGAAGAAATTATTTACTCTAAAGCCAATTCCGAGGCCGAATACATGGACCTCTCAACACTTTTGGACAGAACAAATGAGGCCATTGATGTAATCATTCGACGTGATGAGAATACTGAAACTGGAGACTACTTGCAGCCTTGCATCGAAGCTGCTCTGAATTTGGGGTGTTCCCTATCAAAAACTTCAAGGAGTCAACGGAACAGCCCAAGATGTTACCTAAATCGCAGCAATGAAGAGGTCCAGAATAAAAAGCAGCGCTTGGAACATCAAATTCAACAGCCATCAAATATGTTATCAGTTTTTCCTCTGTACTATGGTAACAACATCCCATTTGATGAGTCACATCATGGTTTTGGTTTTGAAGATCACAACACTTCTGGACCTGCCATTGTGGGTGGTGCTCAGGATCTCTTGTCCTTCTACTTAAATCCTTCAAGTTCAAGTCATGGATCCCATTCCCAATCATTTATTATTGTTGGTGATGCTGAGAACTCATGCACAAATGAATGTGATCTATCATTGAGGTTAGGTCCCCTCACTATACCAGCACCTAGTTTTGAAAATGGTCATGTTCAGGAGACTGAAGTGAGAAGCAAGGACCAATCTATGGGAGTGCAAGTGTGGAACCAAGAGTGCAAAGAAACTGAGGTTTCTAGACTTGAGCTTTACTAG 855 0.4257 MPRPGPRPYDCVRRAWHSERHHPIRGTLIQEIFRVVDEIHGSATKKNKEYQEKLPVVVLKAEEIIYSKANSEAEYMDLSTLLDRTNEAIDVIIRRDENTETGDYLQPCIEAALNLGCSLSKTSRSQRNSPRCYLNRSNEEVQNKKQRLEHQIQQPSNMLSVFPLYYGNNIPFDESHHGFGFEDHNTSGPAIVGGAQDLLSFYLNPSSSSHGSHSQSFIIVGDAENSCTNECDLSLRLGPLTIPAPSFENGHVQETEVRSKDQSMGVQVWNQECKETEVSRLELY. 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00991 284 Gene3D Coactivator CBP, KIX domain 11 87 IPR036529 GO:0003712|GO:0006355
Seca4g00991 284 MobiDBLite consensus disorder prediction 121 146 - -
Seca4g00991 284 Coils Coil 134 154 - -
Seca4g00991 284 PANTHER COACTIVATOR CBP, KIX DOMAIN-CONTAINING PROTEIN-RELATED 143 262 - -
Seca4g00991 284 MobiDBLite consensus disorder prediction 121 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00991 Seca-Chr4 15970949 15973372 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00991 - - ccaj:109817679 338.961