Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00983 ATGATGGATCCAATTAACCTTTCACCAGCTGATGGACTTGAAGCAGTCCAACAAAATGGTGTCTATGAAGAACTCTCTAATCCTGTAAAGAATGGTGTTGTTTCAAATGTAGACCCCAGTGTTTCGGAAATTTCAGAAACTGTAGCTCCGAATGGAAGTTTTGAAAATGTCAACCAGTTGGATAGCATCCCAACTGATAACATGTCTGTGTCAGAAAACAAAGAAGGATCAAATGACAAGATAGATGGAAACAATGTCACCATTTCTAAGGAAGAGAAAGTAGAGATCATAGATGAAACTGGGCAACTAAGAGCACAAAAGGCTCCTGTCAAGAGTAAGAATGCAAAGCCACCAAGTCCCAGAGGTGTTCATGCAAGTTCAGTAAAAAAGAGCAAAGATGGAAAAGATGAAGAGGCAGCATCTGCTGTTTCAAATGGTACTTCTGCTTTAGACTCTCATCCAAGACAGCCTATTAAAAACAGATCATTCAATGACAAGCAGACTCAATTGTCCAAGCAACCTGGAAAGTCTGATGCGGCATCTTCTGAAGCACCAATGGAGAAGACTAGACCACGATTATTGAAGAAGGGGCCACCTGATAATCTTCAAGGAAAAGAGGAATCTTCTTCAAGTCCTACTGCAGACGATGCCAAACCTCGCAGGTTGGGGACACGTCCAAATTATGGATTCAGTTTCAAGTGTGATGAGAGGGCTGAGAGAAGAAAAGAGTTCTACACTAAGCTTGAGGAAAAGATTCATGCAAAGGAAGTAGAGGAGAGTAACATGCAAGCAAAAACCAAGGAGACCCAAGAAGCTGAGATTAAGATGCTTAGGAAAAGTCTAGCATTTAAAGCAACGCCAATGCCAAGCTTCTACCAGGAGCCTACTCCTCCTAGGGTGGAGTTAAAGAAGATACCAACTACAAGAGCAAAATCTCCCAAGCTTGGTCGTAGGAAGAGTTTAACACATTCAGAACCAGAAGGAAACACTAGTAGCAATGCTCAACAAGGTCGTTTAAGTCTGGATGAGAAAGTGACTCCGAATAACCCCACTAAAGGAATTAGTCCTGTTCATCAAAAGAAGCCGCAACGAAAATCTCTTCCTCCACGACTGACTTCTGAAAGGACCAGTTCATCCAATTCAGCAACTGCACGTACTTCATCGAAGGCAGTGAATGAAGAGAAAACCTCCTTATCTAGTGTAACAACTGAAGTTACCACCTTGTCTAATGTAACAGGGGAAGAGAAGGTTGAGATGGCTGCAGCCACTGAAGAGAACAATGCCTTGTCTGTTGAGACAATTGAAGCTCTGCGTCTGAACATAGAGGCAGGTGAAGCACAGTCTCATGTGAATGGTGATTTAGTCATTGAAGAGAAACCACAGATCACCTTGGTACAAGAACCCATAACGGCAGGGCATTAA 1422 0.4262 MMDPINLSPADGLEAVQQNGVYEELSNPVKNGVVSNVDPSVSEISETVAPNGSFENVNQLDSIPTDNMSVSENKEGSNDKIDGNNVTISKEEKVEIIDETGQLRAQKAPVKSKNAKPPSPRGVHASSVKKSKDGKDEEAASAVSNGTSALDSHPRQPIKNRSFNDKQTQLSKQPGKSDAASSEAPMEKTRPRLLKKGPPDNLQGKEESSSSPTADDAKPRRLGTRPNYGFSFKCDERAERRKEFYTKLEEKIHAKEVEESNMQAKTKETQEAEIKMLRKSLAFKATPMPSFYQEPTPPRVELKKIPTTRAKSPKLGRRKSLTHSEPEGNTSSNAQQGRLSLDEKVTPNNPTKGISPVHQKKPQRKSLPPRLTSERTSSSNSATARTSSKAVNEEKTSLSSVTTEVTTLSNVTGEEKVEMAAATEENNALSVETIEALRLNIEAGEAQSHVNGDLVIEEKPQITLVQEPITAGH. 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00983 473 MobiDBLite consensus disorder prediction 369 410 - -
Seca4g00983 473 MobiDBLite consensus disorder prediction 288 410 - -
Seca4g00983 473 MobiDBLite consensus disorder prediction 325 356 - -
Seca4g00983 473 MobiDBLite consensus disorder prediction 47 72 - -
Seca4g00983 473 PANTHER PROTEIN WVD2-LIKE 4 94 443 IPR044833 GO:0008017
Seca4g00983 473 MobiDBLite consensus disorder prediction 183 202 - -
Seca4g00983 473 MobiDBLite consensus disorder prediction 47 236 - -
Seca4g00983 473 Pfam Targeting protein for Xklp2 (TPX2) domain 230 301 IPR027329 -
Seca4g00983 473 MobiDBLite consensus disorder prediction 73 100 - -
Seca4g00983 473 Coils Coil 245 265 - -
Seca4g00983 473 MobiDBLite consensus disorder prediction 141 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00983 Seca-Chr4 15848680 15855623 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00983 - - gsj:114408962 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00983 4 15848680 15855623 Seca4g00983 4 15848680 15855623 ECH
Seca4g00983 4 15848680 15855623 Seca4g00983 4 15848680 15855623 PCT