Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00945 ATGAAGGGCACGGTGGTGACTGGCGGTCCCCATGCGATACCAGGGTGGGAGATCTCTGGTTTCATTGAATACATAAAATCAGGGCAGAAACAGGGTGACATGTTGTTGACAGTGCCAGAGGGAGATCATGCGGTGAGGCTTGGTAATGACGCCTCTATTAAGCAAAAGATAAAAGTGATCAAAGGGATGTACTATGCTGTCACATTTGTGGTAGCACGCACGTGTGCACAACAAGAGCAACTCAATGTGTCTGTGACTCCAGATTGGGTGGTTCTTCCAATGCAAACATTGTATAGCAGCAATGGTTGGGATGCCTATGCATGGTCCTTTCTAGCAGAATCTTCCCCTGAGGTGGAGATGGTTATTCATAACCCGGGAGTGGAAGAAGATCCAGCTTGTGGACCTCTAATTGATTCTATTGCTCTCAAGCCTCTTTACCCTCCTAGACTAACTAACAGGGGTGTGCTTATCCCACCCAACATTGTAGACCTTGATGAACACTCTCCCCTACCAGGATGGATAGTGGAGTCCCTCAAAGCAGTGAAATACATAGATTCAGATCATTTCTCAGTTCCACAAGGTAAAAGAGCGGTGGAGCTTATAGCAGGAAAAGAGAGTGCCATTGCACAAGTAGCCAGGACCATTGCTGGCAAAACTTATGTCCTCTCTTTTACTGTGGGAGATGCTGGCAATTCCTGTGAAGGGTCATTGGGTGTTGAAGCATTTGCAGCTAAAGAACGTATAGAGTTGTCTTATGAGTCCAAAGGCAAAGGTGGGTTTAAGCGTGCAACGCTCAAGTTCGTGGCTGATAGCACAAGAACACGCATTGTTTTCATTAGCACTGCCTACACTATGAGAAGCGATGACCACTCTTCACTATGTGGGCCTGTGGTTGATGATGTCAAATTGCTCAGCCTTCGCAAATTACTGTAG 933 0.4652 MKGTVVTGGPHAIPGWEISGFIEYIKSGQKQGDMLLTVPEGDHAVRLGNDASIKQKIKVIKGMYYAVTFVVARTCAQQEQLNVSVTPDWVVLPMQTLYSSNGWDAYAWSFLAESSPEVEMVIHNPGVEEDPACGPLIDSIALKPLYPPRLTNRGVLIPPNIVDLDEHSPLPGWIVESLKAVKYIDSDHFSVPQGKRAVELIAGKESAIAQVARTIAGKTYVLSFTVGDAGNSCEGSLGVEAFAAKERIELSYESKGKGGFKRATLKFVADSTRTRIVFISTAYTMRSDDHSSLCGPVVDDVKLLSLRKLL. 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00945 310 PANTHER OS02G0527500 PROTEIN-RELATED 1 305 - -
Seca4g00945 310 FunFam DUF642 family protein 144 303 - -
Seca4g00945 310 Pfam Protein of unknown function (DUF642) 1 143 IPR006946 -
Seca4g00945 310 Pfam Protein of unknown function (DUF642) 163 303 IPR006946 -
Seca4g00945 310 SUPERFAMILY Galactose-binding domain-like 47 144 IPR008979 -
Seca4g00945 310 Gene3D - 160 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00945 Seca-Chr4 15346117 15347802 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00945 - - gmx:100801917 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00945 4 15346117 15347802 Seca4g00945 4 15346117 15347802 ECH