Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00894 ATGGAATTAGAAGAAGGGAATGAGGGATGGAAAGCCACAAGCAAGAAACTGAGAGAAGCATGTGAGAATCATGGTTGCTTCCTCGTGTTTGAGACATTGAAGTCCATGAGCTCAAAGATGTTAAATTTGTGTTTTCTCATCATGAAAATGATTACAAAAGGTTATGTCCTTCCGCAACATTACATTTTAGATGTTGAAAACATGAAGAGCAATAGCAATTCAAGGTTGATGAAGTACAAATTTCCTGAAAAAAGCAGCAACGATGCCTCTAAGGTTGCCCTCATAGCTCACATTGACAAAAGTGCCTTAGCCATTCTATGCCAAAATGAAGTCCAGGGTCTGCAGATCCTAACCGAAACGGGAAAATGGACTAATTTAAAGATTCCCCAGGATGAATTTTTGGTCATTCTTGGTGATATATTGAAGGTATAA 432 0.3843 MELEEGNEGWKATSKKLREACENHGCFLVFETLKSMSSKMLNLCFLIMKMITKGYVLPQHYILDVENMKSNSNSRLMKYKFPEKSSNDASKVALIAHIDKSALAILCQNEVQGLQILTETGKWTNLKIPQDEFLVILGDILKV. 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00894 143 SUPERFAMILY Clavaminate synthase-like 5 142 - -
Seca4g00894 143 Gene3D - 29 143 IPR027443 -
Seca4g00894 143 Pfam 2OG-Fe(II) oxygenase superfamily 76 142 IPR044861 -
Seca4g00894 143 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 31 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00894 Seca-Chr4 14839031 14840719 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00894 - - gmx:100790408 145.206