Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00864 ATGCCGAGAATGGATGACATTCTAAACCTTCCTGTGCAAGACCCTCCTTGTCCTGAGTTTTCTGCTGCTCATATAAATTGGGTAAAATTAGAAGGTGGTCGCCAAGGCGGTGATGATATTGCTTTGATTCCTTTTGCCAGAGTTGATGATTTTGTAAAAGGGGAATCTTCCAATCCAGAATGCCCTGCTAGCTTCCGTGTAGAATCAAGAAGAAAGAGACCTATAGGGAGCATAGCAAAACCAAGGGTTGATGGCTATCTTGAATACACACTATATTGGTGTTCATATGGTCCTGAAGACTACCGAGAGAGTGATTCTGGTATAGGAGATGGCACAAGCACCAAACCTGCTTCAGGAAAGGGGAGCAGGCCGGGGAGGCGGCACATGATGAGAGGCTGCCTATGCCATTTCACTGTAAAAAGACTATACACCCGACCCCATCTTGCGCTAATCATATATAATCAAAGAAGGCATGTAGATAAATCAGGGGTACCTTGTCATGGAATGCTTGACAGGGATGCAGTAGGGACAAGAGCTATGTATGCTCCACGAATTTCAGATGAGTTACGGCAGAAAGTTATGTCTATGCTTTATGTTGGAATATCTTTGGACAATATAATACAGCACCATGCAGAGGTGATGCAGAAGCAAGGTGGACCTCAAAACCGTGATGATTTTCTCACTCGAAATGATGTGCGCAACATGGAAAGGATTATTCGTAATTCTTCACTTGAGCTACAGGGAAATGATGAATGCAATGTAAAGATATGGGTTCAGCGCCATCAGAAGCATGTTTTCTATTTCCAAGATAACTCAGGTTCAGAATCTCTTGTTTTGGGTATACAGACAGATTGGCAGCTGCAACAAATGCTTCGTTATGGAAGTAACAGTTTCATTTCTTTTCATTCAACATTTGGCTTGAAAAAGCTGAAGTATCCCGTATGTTCTTTACTTGTTTTCGATTCATCTCAAAATGCAATTCCAGTTGCTTGGATCATCACCTCATCTTTTGTTGGTAAAGATATTCATAAATGGATTGTATTGCTATCTGAAAGATTACGAACCAAGGATCCCAGATGGAGGCCTAATGCTATTTTGTTGGATGATCCATCTTTTGACTATTCTATCATAAGAGAGGCCTTCCAGTGTCGCATCCAGTTGTGCGCTTGGCATGTTCGCCGTGCATGGATAAAAAAGCTTATCAAGAAATGTTGCAACTTTGAGGTGCAACGTGAGATGTTTAGGCACTTGGGATGGATTTTGTACTCTTCAAGGTGTGGACCAAGTGCTATGGATGCAGTTGAAGAGTTTATGCAGATTTTTGTTGACCAGTGTGCCTTCATGGACTATTTCAAGAGTCATTGGCTAGCTGTTATAGATGTGTGGATTAATGGAATAAAATCACTCCCTGTGACAACTCCTGAGCCACATGCTGCAATAGAATCTTATCACCTAAAATTAAAATCGACACTTTTGAAGGAAAATTATGCTAATTTCTGGTCAAGAGTTGACTGGTTAATCCACACTTTAACTACTGAATTTCACTCGTTATACTGGATAGATCAGTACAGTTTAGAGACTGGGTATTTTGAGCATCTACGAGCCAATTCTTTCTCCGCTAATGCTTGGTATCATGCTCTTCATATTCCAGATGTTGATGTGATACTAGATGAGCAAAATCTCCATCTTGCCAAAGTTTTATCTCAGACTGACAGAAGCTTGGTTTATACAGTATGGAATCCTGGTTCAGAATTTTCACTTTGTGATTGTTCCTGGTCTAGGCTGGGAAACCTCTGTAAACATGTCATCAAGGTGGCAACTTTCTGTAGAAGTCGGCAGGTTGCAAGACCATTATTGTCTGCTCAAGTTTACAAGCAGTCTTTGCTCACCCTTCTCCATAATCCTCCAGATGATCCTTTAGTTCTTGATCATACCATTCTACATGTGGCTCGTTTGCAACAAGACATTAAGGCCCTAGAAGACTTGTCAAATAGTGGATTGCTCCAGCCTATAGCCCCTGATTTGAGTTCTCAAATGGCTGAAAATCCTCTGTTTTTTCAGCGCTTCCATTGA 2073 0.4129 MPRMDDILNLPVQDPPCPEFSAAHINWVKLEGGRQGGDDIALIPFARVDDFVKGESSNPECPASFRVESRRKRPIGSIAKPRVDGYLEYTLYWCSYGPEDYRESDSGIGDGTSTKPASGKGSRPGRRHMMRGCLCHFTVKRLYTRPHLALIIYNQRRHVDKSGVPCHGMLDRDAVGTRAMYAPRISDELRQKVMSMLYVGISLDNIIQHHAEVMQKQGGPQNRDDFLTRNDVRNMERIIRNSSLELQGNDECNVKIWVQRHQKHVFYFQDNSGSESLVLGIQTDWQLQQMLRYGSNSFISFHSTFGLKKLKYPVCSLLVFDSSQNAIPVAWIITSSFVGKDIHKWIVLLSERLRTKDPRWRPNAILLDDPSFDYSIIREAFQCRIQLCAWHVRRAWIKKLIKKCCNFEVQREMFRHLGWILYSSRCGPSAMDAVEEFMQIFVDQCAFMDYFKSHWLAVIDVWINGIKSLPVTTPEPHAAIESYHLKLKSTLLKENYANFWSRVDWLIHTLTTEFHSLYWIDQYSLETGYFEHLRANSFSANAWYHALHIPDVDVILDEQNLHLAKVLSQTDRSLVYTVWNPGSEFSLCDCSWSRLGNLCKHVIKVATFCRSRQVARPLLSAQVYKQSLLTLLHNPPDDPLVLDHTILHVARLQQDIKALEDLSNSGLLQPIAPDLSSQMAENPLFFQRFH. 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00864 690 MobiDBLite consensus disorder prediction 104 126 - -
Seca4g00864 690 ProSiteProfiles Zinc finger SWIM-type profile. 576 610 IPR007527 GO:0008270
Seca4g00864 690 PANTHER ZINC ION BINDING PROTEIN 1 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00864 Seca-Chr4 14316234 14321606 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00864 - - gmx:100779025 1321.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00864 4 14316234 14321606 Seca4g00864 4 14316234 14321606 ECH