Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00862 ATGCTGAGGAAGAGGAGCAGGTCACAGCAGAAAGATCAACATCACATGGGTCATCTGACAATCTCTGATGCTAATTCTCAATCTCATGCTTTGGGGCGCAACATCAAAGGCCACTCAATTTTCAATGTCCCTTGTGTGTTTGTGGGTCTGGGTCCTAAATGCTTATTGGATTCTGATTCAGTGAGGAGCCCCACTTCTCCACTAGATGCTAGAGTTCTTTCAAATCTAGGCAACCCTGTTAGAAACCCAAGACCAACATCCCATGAGGGGCACCAAAGGAGCTGGGATTGCTGCAAGGTAGGTCTAAGCATTGTTGAATCTTTGGAAGACTGTTCTAAGTTTCCTTGGAAAATTCTCCCATCACCACAGGGGAAAAAAGCTTGTCTCACTCCCCAAATGATGATCAAATCCCCAAATTTTCAAACCTGTATGGATGCTGTTAAGGCATCAAAGTCTTTACCCAAAGATTTTTGTAAGGTTCCTTATACCAAAAATGAACCAGTTATCCCCAAAGGTAAATCCAGTGTTCTTTTTGAGATTGGAGAAACAGCTCAAGAGCATCAACAACCATTTGGTAAAACCAGGTCCTGTTCATTAGACTCATGCAGTCCATTGAAATTCCTCTCTGGTTTAACCACTCCCAACACTGATTCAGATTTTGTTTGGAAAGATATGAGCATCCAAATGAGCTCTCCTCCTCATTTTATTGGAGGAAGCCAGAACCCAAACATCTTCCTACCTATAGAGTTAAAATCAAACAGTGTTTCCATTTGCTCTCCCAATGAATTTATCAAGTCTCTATCAGCTAGTGAGATTGAACTCTCTGAGGACTACACATGTGTGATTTCCCATGGTCCCAATCCCAAAACAACTCATATCTTTGGTGACTGCATCTTGGAGACTCATTCTAATGGATTTAAACCCCAATTTAAGAATGAAGAGAAGGAGAAGGTAATGACCCTGGTGGGTAACAGGTTGCAGACTCCAAACCAATATCCCTCAAGTGCCTTCTTAAGTTTCTGCCTCCAATGCAACAAGAAACTGGATGAGGGGAAAGATATTTATATTTATGGAGGTGACAAAGCATTTTGCAGTTTAGCTTGCCGGGAGATTATGATTGATGAGGAACAAGAGGAATCCAACCCTTCTTCTGAAAGCTCTCAAAAGAAAAATTTTGGTGAGCAACTTTTTGTACCAGACACATAA 1206 0.4154 MLRKRSRSQQKDQHHMGHLTISDANSQSHALGRNIKGHSIFNVPCVFVGLGPKCLLDSDSVRSPTSPLDARVLSNLGNPVRNPRPTSHEGHQRSWDCCKVGLSIVESLEDCSKFPWKILPSPQGKKACLTPQMMIKSPNFQTCMDAVKASKSLPKDFCKVPYTKNEPVIPKGKSSVLFEIGETAQEHQQPFGKTRSCSLDSCSPLKFLSGLTTPNTDSDFVWKDMSIQMSSPPHFIGGSQNPNIFLPIELKSNSVSICSPNEFIKSLSASEIELSEDYTCVISHGPNPKTTHIFGDCILETHSNGFKPQFKNEEKEKVMTLVGNRLQTPNQYPSSAFLSFCLQCNKKLDEGKDIYIYGGDKAFCSLACREIMIDEEQEESNPSSESSQKKNFGEQLFVPDT. 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00862 401 MobiDBLite consensus disorder prediction 67 91 - -
Seca4g00862 401 ProSiteProfiles Zinc finger FLZ-type profile. 336 380 IPR007650 -
Seca4g00862 401 Pfam zinc-finger of the FCS-type, C2-C2 330 377 IPR007650 -
Seca4g00862 401 MobiDBLite consensus disorder prediction 375 401 - -
Seca4g00862 401 PANTHER FCS-LIKE ZINC FINGER 11 1 398 IPR044585 -
Seca4g00862 401 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00862 Seca-Chr4 14305453 14307389 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00862 - - gmx:100779553 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00862 4 14305453 14307389 Seca4g00862 4 14305453 14307389 ECH
Seca4g00862 4 14305453 14307389 Seca4g00862 4 14305453 14307389 PCT