Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00858 ATGCAGGAATTTCTGACCATTTATGATGAGCTATTGTCTGAAGAGATTGAAACGGATAGAGTTCAAATTGACAACTTCATCCAACGTCCTCTTGTACGTCTTCAAAAATATATGGCAGAACTGAAGCCTGGTAAGAATTTAGATGATAAGGCTTTATCCCTGAATGAGGTAATCAGATCATGCAAGACAGAGATGTATCACTATGCTCGTGTTTCTGGACTACATGTTCTTGAGTGTATTATGGATACCGCCTTGTCTGCTGTGAAGAGGGAGAAGCTGGAAGAGGCTAGCAATGTCCTCCAATTGTTTCCACAACTTCAACCTTTGGTAGCTGCCATGGGTTGGGACTTATTGGCCGGTAAAATAGCAGCAAGGAGAAAATTAATGCAACTTCTCTGGACAAGTAAGTCACAAGTACTTCGGCTTGAAGAATCTTCTCTTTATGGTAATAAATCAGATGAGATGTCTTGTGTGGAGCATCTATGTGATACTTTATGTTATCAGCTTGATCTTGCCTCTTTTGTTGCTTGTGTAAATTCTGGCCAATCTTGGAATTCAAAATTCTCATTGGTGCTTTCTGGAAAAGAACAAGTGGCATCTAGAGATGAAGATGCTTATTCTGATCCTTTTGTTGAGAACTTTGTGTTGGAACGACTTTCGGTCCAAACTCCTCTCCGGGTACTATTTGATGTTGTTCCAGGCATAAAATTCCAGGAAGCCATTGAATTGATCAGTATGCAGCCAATTGCTTCTACTCTGGAAGCCTGGAAGAGGAAGCAAGATGTAGAACTCATGCATATGCGTTATGCTCTAGAATCAACTGTTCTTGCTTTGGGAGCAATAGAAAGGAGCATGTCTGATGAAATAGAAACACATCAAGATGTGCCATTATTTCATTTGAAGGACTTGCAGAGCCACTTGGATGCTATTAGTAATCTTCCACGCAAGATTTTGATGGTGAATGTTATAATTTCGTTACTGCATATGGATAATATATCTGTTAACTTGATGCATTGTGGATCACCATGGAGTGATTCTAAATTATCCAATGCATGTTCTTCAGAACATAGTTGTTCAACTAGAAGTGAAGGAGGAAATGAAATGGTTATATCATTCACTGGTTTGTTACTTGATATATTGCGTCATAACATTCCCTCATCTGTGGTTGAATTAGAGAACATACTAGATAGTGGTGTAAGCACAACCAGCAGACAGGCCCTTGAGTGGAGAATGTCAATCTCAAAGCGTTTTATTGAAGAGTGGGAATGGCGTTTGTCAATTTTGCAGCATCTTCTACCATTATCTGAACGCCAATGGAGATGGAAGGAGGCACTGACAGTGTTACGTGCAGCTCCCTCCAAGCTACTCAACCTTTGCATGCAGAAAGCAAAGTTTGATATAGGAGAAGAAGCGGTTCATCGATTTTCATTATCTGCTGAAGACAAAGCAACCCTTGAATTAGCTGAATGGGTAGATAGTGCCTGCAAAACAGCATCTGTAGATGATGTGGTGTCCCGTGTACAGGATCTAGATTTTTCCTCTTTGCGCTCACAGTTGGGTCCCCTGGCTACAATTCTTCTTTGCGTTGATGTTGCTGCAACTTCTGCAAAGTCTGCAAGGATGTCTCAACAGCTACTGAATCAGGCCCAAACTATGTTATCTGAGATATATCCAGGAGGATCTCCCAAAGATGGCTCCACTTATTGGGATCAGATCCTTGAAGTGGGAATCATCTCTGTGTCACGGCGTCTTCTGAAGCGCTTACACGAGTTCTTGGAGCAGGACAACCCTCCAGCACTTCAGGCAATTCTATCTGGGGAAATTGTCGTCACGTCATTGAAAGAGTCACACCGGCTAGAGCAGAGGGAGCGTGCTCTTGCTCTGCTGCATCAGATGATTGAAGATGCTCATATGGGCAAGCGACAGTTTCTCAGTGGTAAGCTTCATAACCTTGCAAGAGCTGTCGCTGATGAAGAAACTGAACCAAGTACTACTAGAGGTGAAGGATTGTATGCTGATCGGGGTGCTATTTCCAACAGTGACAAGGACATTGTACTCGGGCTCGGGTTAAAAGTTATTAAACAAGTGCCTTTGAGTTCAGCTGGAGGAGAAACCGGCCTGCAGTCTGCTGGTTATGACATTAAAGACTCTGGAAAGAGAATATTTGCTCCCTTAAGTGCCAAACCTATGACATATCTATCGCAATTCATTCTTCATGTTGCTGCAATTGGTGACGTAGTTGACGGGACTGATACAACTCATGATTTTAACTTTTTCTCTGTTGTTTATGAGTGGCCTAAGGATCTTTTGACCCGTCTTGTTTTTGAAAGAGGCAGTACTGATGCAGCTGGGAAGGTAGCTGAAATTATGTGTGCTGATTTTGTACACGAGGTGATTTCTGCATGTGTGCCTCCAGTTTATCCTCCACGATCTGGACATGGATGGGCATGCATTCCAGTTGTTCCTACATTTCCTAAAAGCAGCTCTGAAAATAAAGTACTGTCTCCCTCATTTAAAGATGCAAAGCCTAATTGCTATTGCCGCTCTTCAGCAACACCTGGAGTTGAATTATACCCTCTCCAATTGGATGTGGTGAAACATTTGGCAAAAATATCCCCAGTGAGGGCTGTCTTGGCATGTGTATTCGGGAGTAGTATACTATACAACAGCAGTAGCTCTTCAATTTCAAGCTCCTTGAGTGATGGATTACATCAGGCTCCGGATGCTGATCGTTTGTTTTATGAGTTTGCTCTCGATCAATCTGAAAGGTTCCCAACTTTGAACAGATGGATACAAATGCAAACGAACCTCCATCGAGTTTCAGAATTTGCTGTAACTGCTAATCAAACAGCTGATGATGGTAACCTTGAAGCAAGGACTTCTGTGAAGAGAGTTCGTGAACATGACCCGGAGACAGAGTCGGATGCTGATGACATTGTTAATAGCAATACAATCCCTGTAGCTCTTACAGACCTAAATAGCCAAGGGGTTGAAACCACAGACTTCTGGCATGATTCCTCAAAATCTGAATCTACCCAACTTGACACCACAGTTTTCCTTTCTTTTGATTGGGATAATGAAGAACCATCTCAGAAGGCAGTGGAACGATTAATTGATGAAGGAAAGCTAATGGATGCTCTTGCACTTTCGGATCGCTTTCTACGTAATGGGGCCTCTGATCAGCTTCTTCAGTTAATCATTGAACGTGCAGAAGAGATCCATTCAAATTCTGCACAGCGTCAAGGATTTGGAGGACGCAATATATGGAGCAATAGTTGGCAGTATTGCCTAAGATTGAAGGACAAACAGCTGGCCGCTAGACTTGCCCTAAGGTATGTACACACATGGGAATTAGATGCTGCTTTGGATGTTCTCACAATGTGCAGCTGCCATCTACCTCAGAATGATCCTATTAGGGAAGAGGTTTTGCAAATGAAACAAGCCTTGCAGAGGTACAGCCACATATTAAGTGCAGATGATCATTATACAAGCTGGCAAGAGGTTGAAGCAGATTGCAAGGAAGATCCAGAGGGGCTGGCACTTAGATTAGCTGGAAAAGGATCTGTTTCTGCTGCACTGGAAGTGGCAGAAAGTGCTGGGTTATCAATTGATTTACGAAGAGAGTTGCAGGGGCGGCAGCTTGTGAAGCTTCTAACAGCTGACCCTCTTAATGGTGGAGGACCAGCTGAAGCCTCACGTTTTCTTTCTTCATTACGGGACACAGATGATGCTTTACCAGTTGCTATGGGAGCAATGCAGCTTTTACCCAATTTGCGGTCAAAGCAACTTCTTGTTCACTTCTTCCTGAAACGGAGAGAAGGGAATCTGTCTGATGCTGAGATTTCCCGGCTTAATTCGTGGGCTTTAGGGCTTCGTGTGCTGGCTGTCTTGCCAGTGCCATGGCAGCAAAGGTGCTCTTCTCTGCATGAGCATCCTCATCTGATTTTGGAGGTGCTACTAATGAGGAAACAATTGCAATCTGCTACGCTGATATTGAAGGAATTTCCTTCTTTACGAGACAACCATGTTATTACTACATATGCAACTAAGGCTATTGCTGTCAGTATCAGCTCGCCTCCTCGGGAACATCGCATATCTGTTTCAGGATCCAGACCAAAGCAGAAGGCAAGATCAGGTGCCCCGCCGAGGTTGTCTTTTACAAGCAGTCTAAGTAACTTACAGAAAGAGGCTCGAAGAGCTTTTTCATGGGCTCCAAAAAATACTGTGGACAAAAATGCTCCGAAAGATGTTTATAGGAAAAGAAAAAGTTCTGGACTGTCTCCCTCTGATAGAGTTGCTTGGGAAGCAATGACTGGAATTCAAGAGGACCGTATTTCATCTTTTTCAACAGATGGGCAAGAACGGCTTCCTTCCGTTTCAATTGCTGAGGAATGGATGCTTACAGGTGACCCACTAAAAGATGAAAGCATTCGTTCATCTCACAGATATGAAAGTGCCCCTGACATTACACTGTTCAAGGCGCTGCTTGCTCTTTGTTCTGATGAATCTGTCTCTGCCAAGATTGCCCTTGACTTATGCATTAATCAAATGAAGAATGTCTTGAGCTCTCAGCAGATGCCTGAGAATGCATCTATGGAAACAATTGGGCGAGCATATCATGCCACAGAAACATTTGTCCAGGGTCTACTTTATGCCAAGTCCCTGCTAAGGAAGCTCACGGGTGGCAGTGAATTGCCAAGTAATTGGGAAAGAAATAGAGATGCTGATGACACATCATCTGATGCTGGTAGCTCTAGTGTGGGAAGTCAATCCACAGATGAGCTATCTGAAATCTTATCACAGGCAGATGTTTGGCTGGGACGTGCAGAGCTGCTTCAAAGCCTTTTGGGATCAGGAATTGCTGCTTCTCTTGATGACATCGCTGATGGAGAGTCAGCTGCCCATCTTCGTGACAGGTTGGTGGTGGAAGAACGGTACAGCATGGCTGTGTATACTGGCAAAAAGTGTAAGATTGATGTCTTTCCAGTGTGGAATGCATGGGGTCATGCATTAATTCGGATGGAGCGTTATGGGCATGCTCGTGTGAAGTTTAAGCAAGCTCTTCAGTTGTACAAGGGTGATCCTGGACCTGTGATTTTAGAGATTATAAATACAATTGAAGGTGGCCCACCAGTTGATGTTTCAGCTGTTCGTTCTATGTATGAACATCTGGCTAAAAGTGCGCCCACAATCTTGGATGATTCCCTTTCTGCTGATTCATATCTCAACATCTTGTACATGCCATCAACATTACCCCGTTCAGAAAGGTCTAGAAGATCTCAAGTATCTGCAAATAATAATTCTATACATAGTCGAGATTTTGAAGATGGTCCTCGGAGTAACCTTGATAGTGTTAGATACAATGAATGTGTCAATTACTTACAAGATTATACACGTCAGCATTTGCTGGGTTTTATGTTTAGGCATGGTCACTACCATGATGCTTGCTTCTTGTTCTTTCCTCCTGATGCTGTCCCACCACCACCACAACCATCAATCATGAGTGGAGTGTCCTCTTCATCTCCCCAAAGATTAGATTCTTTGGCAACTGATTATGGGACAATTGATGATTTGTGTGAATTGTGCATTGGTTATGGTGCTATGCCAATCTTGGAGGAAGTCATTTCGACTAGAATGTCATCAACTAAATCCCAGGATGCAGTGGTGAATCAGTATACTATGACAGCCCTTGCCCGTATTTGCTTCTATTGTGAAACTCACAAGCATTTCAATTATTTATACAGGTTTCAGGTAATTAAAATGGACCATGTTGCCGCTGGACTCTGTTGTATTCAATTGTTTATGAATTCTTCTTCACAAGAGGAAGCCATTAGACATTTGGAAAATGCTAAGATGCATTTTGATGAAGGATTGTCTGCAAGGTACAAAGGTGGGGAATCTACCAAGCTTGTGACAAAAGGTCTGAGAGGAAAAAGTGCATCTGAAAAGCTTACCGAAGAAGGTCTTGTCAAATTTTCTGCTAGGGTATCAATTCAGGTTGAAGTCGTTAAATCCTTTAATGACTCAGAAGGACCGCAATGGAAGCATTCACTTTTTGGGAATCCAAATGATCCAGAAACTTTTAGACGAAGGTGTAAAATTGCTGAGGTTCTTGTTGAGAAGAATTTTGATTTGGCATTCCAAGTAATCTATGAATTCAATCTTCCCGCTGTTGATATATATGCTGGTGTTGCTGCATCTCTTGCTGAGAGAAAAAGAGGTAGCCAATTGACAGAATTCTTTAGAAACATCAAGGGCACAATAGATGACGATGACTGGGACCAGGTCTTGGGTGCTGCAATAAATGTATACGCCAATAAGCATAAAGAACGGCCAGACCGTCTAATAGACATGTTAACTAGCAGCCACAGAAAGGTTCTTGCTTGTGTAGTTTGTGGTCGTTTAAAAAGCGCATTTCAAATTGCTTCTCGGAGTGGAAGTGTGGCTGATGTTCAATACGTTGCTCATCAGGCATTGCATGCAAATGCACTTCCCGTACTTGATATGTGTAAGCAATGGTTGGCTCAGTACATGTAA 6537 0.4279 MQEFLTIYDELLSEEIETDRVQIDNFIQRPLVRLQKYMAELKPGKNLDDKALSLNEVIRSCKTEMYHYARVSGLHVLECIMDTALSAVKREKLEEASNVLQLFPQLQPLVAAMGWDLLAGKIAARRKLMQLLWTSKSQVLRLEESSLYGNKSDEMSCVEHLCDTLCYQLDLASFVACVNSGQSWNSKFSLVLSGKEQVASRDEDAYSDPFVENFVLERLSVQTPLRVLFDVVPGIKFQEAIELISMQPIASTLEAWKRKQDVELMHMRYALESTVLALGAIERSMSDEIETHQDVPLFHLKDLQSHLDAISNLPRKILMVNVIISLLHMDNISVNLMHCGSPWSDSKLSNACSSEHSCSTRSEGGNEMVISFTGLLLDILRHNIPSSVVELENILDSGVSTTSRQALEWRMSISKRFIEEWEWRLSILQHLLPLSERQWRWKEALTVLRAAPSKLLNLCMQKAKFDIGEEAVHRFSLSAEDKATLELAEWVDSACKTASVDDVVSRVQDLDFSSLRSQLGPLATILLCVDVAATSAKSARMSQQLLNQAQTMLSEIYPGGSPKDGSTYWDQILEVGIISVSRRLLKRLHEFLEQDNPPALQAILSGEIVVTSLKESHRLEQRERALALLHQMIEDAHMGKRQFLSGKLHNLARAVADEETEPSTTRGEGLYADRGAISNSDKDIVLGLGLKVIKQVPLSSAGGETGLQSAGYDIKDSGKRIFAPLSAKPMTYLSQFILHVAAIGDVVDGTDTTHDFNFFSVVYEWPKDLLTRLVFERGSTDAAGKVAEIMCADFVHEVISACVPPVYPPRSGHGWACIPVVPTFPKSSSENKVLSPSFKDAKPNCYCRSSATPGVELYPLQLDVVKHLAKISPVRAVLACVFGSSILYNSSSSSISSSLSDGLHQAPDADRLFYEFALDQSERFPTLNRWIQMQTNLHRVSEFAVTANQTADDGNLEARTSVKRVREHDPETESDADDIVNSNTIPVALTDLNSQGVETTDFWHDSSKSESTQLDTTVFLSFDWDNEEPSQKAVERLIDEGKLMDALALSDRFLRNGASDQLLQLIIERAEEIHSNSAQRQGFGGRNIWSNSWQYCLRLKDKQLAARLALRYVHTWELDAALDVLTMCSCHLPQNDPIREEVLQMKQALQRYSHILSADDHYTSWQEVEADCKEDPEGLALRLAGKGSVSAALEVAESAGLSIDLRRELQGRQLVKLLTADPLNGGGPAEASRFLSSLRDTDDALPVAMGAMQLLPNLRSKQLLVHFFLKRREGNLSDAEISRLNSWALGLRVLAVLPVPWQQRCSSLHEHPHLILEVLLMRKQLQSATLILKEFPSLRDNHVITTYATKAIAVSISSPPREHRISVSGSRPKQKARSGAPPRLSFTSSLSNLQKEARRAFSWAPKNTVDKNAPKDVYRKRKSSGLSPSDRVAWEAMTGIQEDRISSFSTDGQERLPSVSIAEEWMLTGDPLKDESIRSSHRYESAPDITLFKALLALCSDESVSAKIALDLCINQMKNVLSSQQMPENASMETIGRAYHATETFVQGLLYAKSLLRKLTGGSELPSNWERNRDADDTSSDAGSSSVGSQSTDELSEILSQADVWLGRAELLQSLLGSGIAASLDDIADGESAAHLRDRLVVEERYSMAVYTGKKCKIDVFPVWNAWGHALIRMERYGHARVKFKQALQLYKGDPGPVILEIINTIEGGPPVDVSAVRSMYEHLAKSAPTILDDSLSADSYLNILYMPSTLPRSERSRRSQVSANNNSIHSRDFEDGPRSNLDSVRYNECVNYLQDYTRQHLLGFMFRHGHYHDACFLFFPPDAVPPPPQPSIMSGVSSSSPQRLDSLATDYGTIDDLCELCIGYGAMPILEEVISTRMSSTKSQDAVVNQYTMTALARICFYCETHKHFNYLYRFQVIKMDHVAAGLCCIQLFMNSSSQEEAIRHLENAKMHFDEGLSARYKGGESTKLVTKGLRGKSASEKLTEEGLVKFSARVSIQVEVVKSFNDSEGPQWKHSLFGNPNDPETFRRRCKIAEVLVEKNFDLAFQVIYEFNLPAVDIYAGVAASLAERKRGSQLTEFFRNIKGTIDDDDWDQVLGAAINVYANKHKERPDRLIDMLTSSHRKVLACVVCGRLKSAFQIASRSGSVADVQYVAHQALHANALPVLDMCKQWLAQYM. 2179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00858 2178 Coils Coil 2174 2178 - -
Seca4g00858 2178 MobiDBLite consensus disorder prediction 1579 1594 - -
Seca4g00858 2178 MobiDBLite consensus disorder prediction 1755 1778 - -
Seca4g00858 2178 MobiDBLite consensus disorder prediction 1566 1594 - -
Seca4g00858 2178 MobiDBLite consensus disorder prediction 1362 1387 - -
Seca4g00858 2178 MobiDBLite consensus disorder prediction 1755 1771 - -
Seca4g00858 2178 PANTHER ZINC FINGER FYVE DOMAIN PROTEIN 6 2178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00858 Seca-Chr4 14212746 14258484 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00858 K19027 - gmx:100813647 3895.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00858 4 14212746 14258484 Seca4g00858 4 14212746 14258484 ECH