Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00856 ATGCACGCCGTAGAAGAAGGTGGCGGCGGCGAGGATCGAAAAGCACGCGTCGAGGAAAGTGGTTTGGAGTCAGAGATCTCGAAGCTTCGTCGACGATGGGAACTGGCTTCTGTTCTCAATTTCTTGGATATGCAGGTGTTTAGTCCAGTACTTGGTAAAGATTTGAAGCTGTCAGCTGAAGAAATTGAGATTGGGCTTGTTAAGCCCGATGCTTCACTTGCAAAGCTTCATATTCAACTTTTGAAGGGAATACCACCTGTGAGTAAAACACTGGATGGTTCTGATAAATGGGTTACTGTACTCTGTAAGAAACTGACCATGTGGTGGCCTTGGGTTGCTGAGGGGAAGATTCCACTTACACCATCTAAAGGAGAGGAGATACCCAAGTACAAGGAACTTGATCCATCAGATCGTTTACTATTGCTAAAAGCACTTTGTGAAGTTAGAGCTGATCAATATGATGCGGTGTCATATGTTAATGATGCTTTAAAAGAAGGAACCCAAGTTTCTTCTTTTCGCAAAGATGCCTTAGGAAGGGATGGAACTAGCACATCCTATTGGTATGATGCAAATGCAAAATGTCACAGTCACAGATTGTACAGGGAAATAATCACATCAAACTCCAGCCCAAAGGTCAAAGGATGCTTATCACTTCCCACCATTAACTTTCAATGGGAAACACTTGCCTCCAATCTTGAACAATTTTCAGAAGTAGCTGAAAATTTCTCATCCAGCAAATCTGCTGCAGAAGTTGCTATTGGCAAGAGGCTTCAAAGTGATGCTATTCCTGTTCTTGAAAAGCTTCATAAGAAGAGAGAAAGAGCATTAAAACGAAAGCAGAGGGAGGACATGCACTTAAAAGATTTTCGGAACTCTTATTCTTCTGGAAATACACGATCTTGTCGCACTCGAAGGCCTATTAGTTACACATTTGAAGCTTATGATCGAGCAATGAAGGAGGCAATACAGTTAACAAAAAACAGGAAAAAGTCTGTGGCGGCTGACCATGATAGAAACAGAGGTTCAGAAGATAAATCCAACATAAAAGATGTTTCATCAGACAGTGATTCTAAAAGGGATGTGCTCCCGCTATCTGATAGTGATGACACTGGTTATGATATTGAGAATCACGGTAGCAGTGAGGAGGATGAGGATATTGATAGCGAGGTAGGTAAATTGGAAGCACACTCAAGCCATGCTGCAGTTTCTTATCCCAAGGGGGTTCGCTGTAGTAAGCGGTTAGCTGGCATCCCTAGCCATGCTGTTCTGGAAAGCAGAGGCTTGACTACAAAGCAAACATTGAGACAAAGACCCACCCTCAATTCTGCCATAGAATCAGTTGTTATACCTGATTCAGAGGATGAAGCACATGAAGGGAAGACAGATATATCGGAGTCTAGTTAG 1404 0.4266 MHAVEEGGGGEDRKARVEESGLESEISKLRRRWELASVLNFLDMQVFSPVLGKDLKLSAEEIEIGLVKPDASLAKLHIQLLKGIPPVSKTLDGSDKWVTVLCKKLTMWWPWVAEGKIPLTPSKGEEIPKYKELDPSDRLLLLKALCEVRADQYDAVSYVNDALKEGTQVSSFRKDALGRDGTSTSYWYDANAKCHSHRLYREIITSNSSPKVKGCLSLPTINFQWETLASNLEQFSEVAENFSSSKSAAEVAIGKRLQSDAIPVLEKLHKKRERALKRKQREDMHLKDFRNSYSSGNTRSCRTRRPISYTFEAYDRAMKEAIQLTKNRKKSVAADHDRNRGSEDKSNIKDVSSDSDSKRDVLPLSDSDDTGYDIENHGSSEEDEDIDSEVGKLEAHSSHAAVSYPKGVRCSKRLAGIPSHAVLESRGLTTKQTLRQRPTLNSAIESVVIPDSEDEAHEGKTDISESS. 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00856 467 MobiDBLite consensus disorder prediction 419 467 - -
Seca4g00856 467 MobiDBLite consensus disorder prediction 325 377 - -
Seca4g00856 467 MobiDBLite consensus disorder prediction 425 446 - -
Seca4g00856 467 MobiDBLite consensus disorder prediction 450 467 - -
Seca4g00856 467 PANTHER REMODELING AND SPACING FACTOR 1 19 390 IPR028938 GO:0006355|GO:0031213
Seca4g00856 467 MobiDBLite consensus disorder prediction 275 301 - -
Seca4g00856 467 MobiDBLite consensus disorder prediction 325 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00856 Seca-Chr4 14169538 14174266 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00856 - - tpra:123899543 641.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00856 4 14169538 14174266 Seca4g00856 4 14169538 14174266 ECH