Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00843 ATGGCTGATGACAAAGCAGTTGGGGAAGGTGAAAAGAAAGAGACAAGTCCTACTGATGCTGGGAATGCAAAGAAGAAGCGCAAGGGATTTCTTTCCCGAATTTGGAATGGAATATTTAGGTTACAAGGTGATGATTTTGAGAAGAGGCTCCAATACATTTCTAAAGAGGAAGCTGCAGTTATTGCTAGAATGACTAGGAGATCACGGTCCTGGAGGCGGATGTCCCGGCATCTTATTATATTTTCTGTTATATTTGAGGTCATTGCTGTAGGTTATGCTATTATGACAACAAGATCAGTGGATATGAATTGGAAAATGAGGGCAATTCGGGTTTTGCCAATGTTTCTTTTGCCTGCTCTAGCATCTGCAGCTTATTCAGCATTTGTCAGCTTCACAAGAATTTGTGATCGCAGGGACCAGAAAATTCTTGAAAGGCTTCGAGCTGAAAGGCAAGCAAAAATTGATGAACTCAAAGAAAAGACAAATTATTACACTACACAACAGCTCATTCAGAGATATGACTCAGATCCAGCCGCAAAGGCAGCTGCTGCAACTGTTTTGGCATCTAAGTTGGGCGCAGATTCTGGTTTGAAAGTGTATCTGGGAGATGAATCCAATCCCAGTGCTCCAATGGGGAAGAGCAATGATGTTGAACTTGTGCAGTCCACTGGACTTCGAAATCGGAAACAAGTTAATTCTAAATCCACTAGTCCAGGGACAGCAACACCAAATGTTGCTGATCAGCAATTAGTAGGTTCAGGGGGAACTGATCAAACTCAGACCTCTGAGTATAATCAACTTGTTGTTGTTGACCATCACCAACCTCAAAGTTCAACCACACAAGATGGAGGATGGATTGCACGAATTGCTGCGTTGCTTGTAGGCGAGGATCCAACACAGTCTTATGCTCTCATATGTGGTAACTGCCACATGCATAATGGTCTAGCTCGGAAGGAGGATTTCCCGTTCATTACATACTACTGCCCGCATTGTCATGCGCTGAACAAACCGAAGCATTTGGATGGGCGTAGTATCTCTGGTCTTACTTCCCCAAACACGGTGTCTCCAAAAACAGAGGTTGGTGAGGCTAGCGCTTCTGCAGCTGAGAGCATAATCACAAGCAATAGTCCCGTAAATGCTATCCCTGAGATTGAGGAAGCAATTGAAAGGGCAATTATTGAGGAGAAAGCGAATTGA 1197 0.4369 MADDKAVGEGEKKETSPTDAGNAKKKRKGFLSRIWNGIFRLQGDDFEKRLQYISKEEAAVIARMTRRSRSWRRMSRHLIIFSVIFEVIAVGYAIMTTRSVDMNWKMRAIRVLPMFLLPALASAAYSAFVSFTRICDRRDQKILERLRAERQAKIDELKEKTNYYTTQQLIQRYDSDPAAKAAAATVLASKLGADSGLKVYLGDESNPSAPMGKSNDVELVQSTGLRNRKQVNSKSTSPGTATPNVADQQLVGSGGTDQTQTSEYNQLVVVDHHQPQSSTTQDGGWIARIAALLVGEDPTQSYALICGNCHMHNGLARKEDFPFITYYCPHCHALNKPKHLDGRSISGLTSPNTVSPKTEVGEASASAAESIITSNSPVNAIPEIEEAIERAIIEEKAN. 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00843 398 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 24 367 IPR040115 GO:0071786
Seca4g00843 398 Coils Coil 140 163 - -
Seca4g00843 398 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 285 335 IPR019273 -
Seca4g00843 398 MobiDBLite consensus disorder prediction 1 24 - -
Seca4g00843 398 MobiDBLite consensus disorder prediction 223 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00843 Seca-Chr4 13910926 13915800 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00843 K23292 - gmx:100797087 578.941