Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00839 ATGACACACTCCAATGGATTCACACACTGTTTGTTTCACTTTATCAGCAAAAACCTTCATTCATGTCTGGTAAAACTCTACTTAGATGAAGGGAAAACTAGTTGCACGGCTTGGCCAAATGGCATAAGAAATCTTGTAATGATGGTCGGGTCAAGAAAGAAATCACTGAAGAGGCCTACTTGGATCATTGTATTGGTTTCTGTGGTATGTCTTGTTATGATTACTGCTTACGTTTATCCATCAACAAACCCCGCAAGATGCTTCTTTTTGTCCTCTAGAAGTCGAGGTTGTCGTACATATGATCTGCATCCGTATGCTTATTTTTCACGGGAACTAACTGATGAAGAGATTGAATCTCGGATTGTTATTAAGGAGTTACTCAAGTCTCTTCCTCTTCATACCAAGAACCCCAAAGTTGCCTTCTTGTTCTTGACTCCTGGTTCATTGCCATTTGAGAAACTCTGGCACATGTTCTTTCAAGGGCATGAAGGCAAATTCTCAATTTATATACATGCATCGAAGGAAAAACCAGCACATGTCAGCCGATATTTTGTTGGTCGAGAAATTCACAGTGAACCGGTGAGTTGGGGGGGTTTTTCTATGGTTGAGGCAGAAAAGAGACTTTTGGCAAATGCACTTTTAGACCCTGATAACCAACATTTTGTCTTGCTGTCTGAAAGTTGTATACCATTGCGCCACTTTGAATTCGTGTACAACTACTTATTGTTTTCAAATGTCAGCTTCATTGAATGGTATATAGAGCACATGTTGCCTGAAGTAGAACAGAAGGATTTTCAAAAGGGTTCACAGGAATGTAGGAATTTAGGAAATCAATATAAACTTTTCTGGTATGCAGCTGATCTGGATCATGTTTGTGCTGCAGTGGTTCTCAATGAAGCGGCAACATGCTATTATAGTTATGGCAGACAATCTCTATTTTACAAAATTCAAACATCACTGCAGGAAGTTGTTGGAAAGAAAAGAATCTGTAAAGATAGCTTCACTGACAAACATCCTGCTGTTCATGTTTTTAACTTCCCCAGCCAAATATGGAGGGAGGACGCAACTGCTATGCTGATGAGCATTACTTACCAACCTTTTTTAATGTCAATGCTTGATCCAGGTGGAATTTCAAATTGGTCGGTAACATATGTTGATTGGTCTGAAGGAAGATGGCATCCTAGATCATTCAGTGCTCATGATATTACTTATAAACTCCTGAAAACCTTAACAAGATCAGTGTTGATTACACCTTGCATGTGGAATGGGTCAAAACGACCATGTTATTTATTTGCCAGGAAGTTTTACCCAGGAACCTTGGATAAATTGATGCGCCTTTTCTCTAATTCTACTCTATTCTAA 1362 0.3913 MTHSNGFTHCLFHFISKNLHSCLVKLYLDEGKTSCTAWPNGIRNLVMMVGSRKKSLKRPTWIIVLVSVVCLVMITAYVYPSTNPARCFFLSSRSRGCRTYDLHPYAYFSRELTDEEIESRIVIKELLKSLPLHTKNPKVAFLFLTPGSLPFEKLWHMFFQGHEGKFSIYIHASKEKPAHVSRYFVGREIHSEPVSWGGFSMVEAEKRLLANALLDPDNQHFVLLSESCIPLRHFEFVYNYLLFSNVSFIEWYIEHMLPEVEQKDFQKGSQECRNLGNQYKLFWYAADLDHVCAAVVLNEAATCYYSYGRQSLFYKIQTSLQEVVGKKRICKDSFTDKHPAVHVFNFPSQIWREDATAMLMSITYQPFLMSMLDPGGISNWSVTYVDWSEGRWHPRSFSAHDITYKLLKTLTRSVLITPCMWNGSKRPCYLFARKFYPGTLDKLMRLFSNSTLF. 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00839 453 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 70 445 IPR044174 GO:0016757
Seca4g00839 453 Pfam Core-2/I-Branching enzyme 139 251 IPR003406 GO:0016020|GO:0016757
Seca4g00839 453 Pfam Core-2/I-Branching enzyme 360 410 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00839 Seca-Chr4 13889623 13896370 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00839 - - gmx:100306431 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00839 4 13889623 13896370 Seca4g00839 4 13889623 13896370 ECH